Automation Engineer Jobs in San Francisco, CA

Automation Engineer jobs in San Francisco are in strong demand, concentrated in SoMa, Mission Bay, and the Financial District across advanced manufacturing, life sciences, robotics, and enterprise software. Employers hiring right now include CRUSOE, HUD, and Kira. Scan the live roles below and apply to whichever ones fit.

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Overview

Open roles341+
Top employerCRUSOE
Work type64% On-site
Top credentialBachelor's degree in electrical engineering
Companies hiring21

Showing 5 of 341+ Automation Engineer jobs

TWIST BIOSCIENCE
Sr Automation Engineer
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TWIST BIOSCIENCE
Added 1w ago
Sr Automation Engineer
TWIST BIOSCIENCE
San Francisco, California
Customer Service
Customer Success
Customer Support
$140k - $169k/yr
Bachelor of Science
1,001-5,000

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Natera
Senior Automation Support Engineer
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Natera
Added 1w ago
Senior Automation Support Engineer
Natera
San Francisco, California
Engineering (Non-Software)
Manufacturing Engineering
Robotics Engineering
$123k - $153k/yr
Bachelor of Science
5,001-10,000

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Mach9
Software Engineer - Test Automation (SDET)
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Mach9
Added 1w ago
Software Engineer - Test Automation (SDET)
Mach9
San Francisco, California
Quality Assurance & Testing (QA Testing)
Software Engineering
Automation QA
Backend Engineering
$130k - $170k/yr
On-Site
None

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CRUSOE
Staff Software Engineer, Internal Tools & Automation
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CRUSOE
Added 2w ago
Staff Software Engineer, Internal Tools & Automation
CRUSOE
San Francisco, California
Engineering (Non-Software)
Mechanical Engineering
Specialized Engineering
$215k - $260k/yr
1,001-5,000

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Waymo
Staff Systems Engineer, Depot & Offhail Automation
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Waymo
Added 2w ago
Staff Systems Engineer, Depot & Offhail Automation
Waymo
San Francisco, California
Project Management
Software Engineering
Technical Product & Program Management
$230k - $284k/yr
Hybrid
Bachelor's degree in electrical engineering

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See All 341+ Automation Engineer Jobs in San Francisco

Find roles in San Francisco that match your experience and apply in just a few clicks.

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Automation Engineer Job Market in San Francisco

Who's Hiring

  • CRUSOE
    CRUSOE44
  • HUD
    HUD15
  • Kira
    Kira15
  • a16z
    a16z15
  • Mach9
    Mach915

Top Industries Hiring

  • Technology & Software74
  • Artificial Intelligence15
  • Investment & Asset Management15

Automation Engineer Jobs in San Francisco: Frequently Asked Questions

How do I get a automation engineer job in San Francisco?

Target the sectors that hire most heavily in San Francisco: life sciences and biotech in Mission Bay, semiconductor and hardware firms in SoMa, and enterprise software companies in the Financial District. Candidates with hands-on PLC, SCADA, or robotics experience stand out, and familiarity with GMP environments is a real edge for the city's large medtech and biopharma employer base.

Which companies hire automation engineers in San Francisco?

San Francisco automation engineer roles are posted by CRUSOE, HUD, and Kira and others right now, based on current listings on Migrate Mate as of September 2026. The city's hiring mix includes large biotech and medtech firms in Mission Bay alongside hardware startups and industrial robotics companies in SoMa.

Are there remote automation engineer jobs in San Francisco?

Yes, though it depends heavily on the role. Automation engineering work that involves physical equipment, lab systems, or manufacturing lines is almost always on-site. About 36% of automation engineer openings tied to San Francisco are remote or hybrid as of September 2026, and those tend to be software-side roles focused on test automation, CI/CD pipelines, or controls software development.

How can I get a automation engineer job in San Francisco with little or no experience?

The most realistic entry path in San Francisco is through a manufacturing or lab technician role at one of Mission Bay's biotech or medtech companies, where employers regularly promote into automation roles once you understand the equipment and processes. Contract and temp-to-hire positions at hardware startups in SoMa are another practical door in, and candidates who can show project work with Python scripting, PLCs, or test frameworks move up the shortlist quickly.

Which industries hire the most automation engineers in San Francisco?

Most automation engineer openings in San Francisco sit in Technology & Software, Artificial Intelligence, and Investment & Asset Management, per current listings on Migrate Mate as of September 2026. San Francisco's concentration of biotech campuses in Mission Bay and a dense cluster of robotics and hardware startups in SoMa are the main drivers behind those industry totals.

See All 341+ Automation Engineer Jobs in San Francisco

Find roles in San Francisco that match your experience and apply in just a few clicks.

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