Remote Software Integration Engineer Jobs
Remote software integration engineer jobs are actively hiring across the U.S., with remote-first firms and distributed engineering teams leading demand in sectors like enterprise software, fintech, and healthcare technology. Employers hiring remotely right now include Affirm, CARIAD, and NVIDIA. Scan the live roles below and apply to whichever ones fit.
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Showing 5 of 17+ Remote Software Integration Engineer jobs
Rapidly Growing Life Sciences Technology Company
Ultima Genomics is a rapidly growing company that is developing ground-breaking genomics technologies. Our mission is to continuously drive the scale of genomic information to enable unprecedented advances in biology and improvements in human health. We have developed a foundational new approach to sequencing at scale that overcomes limitations due to the high costs of current technologies. We are well-funded and have raised approximately $600 million from global top-tier investors. Our team brings together unique and diverse expertise across multiple disciplines, from healthcare and life sciences, to engineering, to technology and software and beyond. We are a collaborative group, including successful entrepreneurs, chemists, hardware and software engineers, genomics and biotechnology experts, molecular and computational biologists, software and algorithm experts, and operations and commercial leaders. Join us to develop and commercialize technologies that unleash the power of genomics at scale and empower the future of human health.
We are looking for a highly motivated Senior Software Integration Engineer to join our team!
As a Senior Software Integration Engineer, you will design and build agents and automated solutions for software integration, testing, release and deployment processes, and will create an authoritative software knowledge base resource for the organization. The ideal candidate is a builder who can translate ambiguous processes into reliable automated systems, and a systems thinker who can turn complex technical information into clear, discoverable structure.
This is a full-time remote position with a preferred location in SF Bay Area.
How You'll Contribute
- Design, build, and maintain AI agents and automated workflows that track software availability, release readiness, testing, and deployment status across many individual software components. Ensure robust orchestration, error handling, and observability to surface failures and edge cases
- Build and maintain a structured knowledge base to serve as the single source of truth for the software estate that can be queried by agents
- Integrate with Atlassian tools (Jira, Confluence), GitHub, Microsoft 365 (Teams, Copilot), Monday.com, and internal systems
- Build connectors and middleware between AI agents and internal or third-party systems as needed to automate data exchange and process handoffs
- Independently identify and execute on automation opportunities in software management
- Other job duties as assigned
Qualifications, Skills, Knowledge & Abilities
- BS/BA in computer science or an engineering discipline
- 5+ years of software engineering experience, including experience building and maintaining automation or workflow orchestration systems
- Proficiency in shell scripting and at least one high-level programming language such as Python in a Linux environment
- Experience building AI agents or LLM-powered applications using agent frameworks or LLM APIs, including tool use and orchestration
- Experience integrating with APIs such as Atlassian (Jira, Confluence), GitHub, Microsoft 365 (Teams, Copilot), or Monday.com
- Understanding of software release, QA, and/or deployment processes is a plus
- Experience with cloud computing infrastructure such as AWS is desirable
- Excel in collaborating both within and across teams
- Excellent written and verbal communication skills
At Ultima Genomics, your base pay is one part of your total compensation package. This role pays between $120,000 and $160,000, if performed in the US, and your actual base pay will depend on your skills, qualifications, experience, and location. Please note that the compensation details listed in US role postings reflect the base salary only, and do not include bonus, equity, or benefits. This role is also eligible for a competitive benefits package that includes: medical, dental, vision, life, and disability insurance; 401(k) retirement plan; flexible spending & health savings account; paid holidays; paid time off; employee assistance program; and other company benefits.
#LI-Remote
Ultima Genomics is proud to be an equal opportunity workplace and is an affirmative action employer. We provide equal employment opportunity for all applicants and employees. We do not discriminate on the basis of race, color, religion, sex (including pregnancy, childbirth, or related medical conditions), gender identity, gender expression, national origin, ancestry, citizenship, age, physical or mental disability, military or veteran status, marital status, domestic partner status, sexual orientation, genetic information, or any other basis protected by applicable laws. See also Ultima Genomics' EEO Policy and Know Your Rights. If you have a disability or special need that requires accommodation, please let us know by contacting recruiting@ultimagen.com.
Rapidly Growing Life Sciences Technology Company
Ultima Genomics is a rapidly growing company that is developing ground-breaking genomics technologies. Our mission is to continuously drive the scale of genomic information to enable unprecedented advances in biology and improvements in human health. We have developed a foundational new approach to sequencing at scale that overcomes limitations due to the high costs of current technologies. We are well-funded and have raised approximately $600 million from global top-tier investors. Our team brings together unique and diverse expertise across multiple disciplines, from healthcare and life sciences, to engineering, to technology and software and beyond. We are a collaborative group, including successful entrepreneurs, chemists, hardware and software engineers, genomics and biotechnology experts, molecular and computational biologists, software and algorithm experts, and operations and commercial leaders. Join us to develop and commercialize technologies that unleash the power of genomics at scale and empower the future of human health.
We are looking for a highly motivated Senior Software Integration Engineer to join our team!
As a Senior Software Integration Engineer, you will design and build agents and automated solutions for software integration, testing, release and deployment processes, and will create an authoritative software knowledge base resource for the organization. The ideal candidate is a builder who can translate ambiguous processes into reliable automated systems, and a systems thinker who can turn complex technical information into clear, discoverable structure.
This is a full-time remote position with a preferred location in SF Bay Area.
How You'll Contribute
- Design, build, and maintain AI agents and automated workflows that track software availability, release readiness, testing, and deployment status across many individual software components. Ensure robust orchestration, error handling, and observability to surface failures and edge cases
- Build and maintain a structured knowledge base to serve as the single source of truth for the software estate that can be queried by agents
- Integrate with Atlassian tools (Jira, Confluence), GitHub, Microsoft 365 (Teams, Copilot), Monday.com, and internal systems
- Build connectors and middleware between AI agents and internal or third-party systems as needed to automate data exchange and process handoffs
- Independently identify and execute on automation opportunities in software management
- Other job duties as assigned
Qualifications, Skills, Knowledge & Abilities
- BS/BA in computer science or an engineering discipline
- 5+ years of software engineering experience, including experience building and maintaining automation or workflow orchestration systems
- Proficiency in shell scripting and at least one high-level programming language such as Python in a Linux environment
- Experience building AI agents or LLM-powered applications using agent frameworks or LLM APIs, including tool use and orchestration
- Experience integrating with APIs such as Atlassian (Jira, Confluence), GitHub, Microsoft 365 (Teams, Copilot), or Monday.com
- Understanding of software release, QA, and/or deployment processes is a plus
- Experience with cloud computing infrastructure such as AWS is desirable
- Excel in collaborating both within and across teams
- Excellent written and verbal communication skills
At Ultima Genomics, your base pay is one part of your total compensation package. This role pays between $120,000 and $160,000, if performed in the US, and your actual base pay will depend on your skills, qualifications, experience, and location. Please note that the compensation details listed in US role postings reflect the base salary only, and do not include bonus, equity, or benefits. This role is also eligible for a competitive benefits package that includes: medical, dental, vision, life, and disability insurance; 401(k) retirement plan; flexible spending & health savings account; paid holidays; paid time off; employee assistance program; and other company benefits.
#LI-Remote
Ultima Genomics is proud to be an equal opportunity workplace and is an affirmative action employer. We provide equal employment opportunity for all applicants and employees. We do not discriminate on the basis of race, color, religion, sex (including pregnancy, childbirth, or related medical conditions), gender identity, gender expression, national origin, ancestry, citizenship, age, physical or mental disability, military or veteran status, marital status, domestic partner status, sexual orientation, genetic information, or any other basis protected by applicable laws. See also Ultima Genomics' EEO Policy and Know Your Rights. If you have a disability or special need that requires accommodation, please let us know by contacting recruiting@ultimagen.com.
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Find JobsRemote Software Integration Engineer Job Market
Who's Hiring
Top Industries Hiring
- Banking & Financial Services
What Employers Look For
The qualifications that appear most often in remote software integration engineer jobs.
- Experience designing and consuming RESTful or SOAP APIs across enterprise systems
- Proficiency with integration platforms such as MuleSoft, Dell Boomi, or Azure Integration Services
- Hands-on experience with messaging systems like Kafka, RabbitMQ, or Azure Service Bus
- Bachelor's degree in computer science, information systems, or a related engineering field
- Familiarity with ETL processes, data mapping, and transformation between disparate data formats
- Experience with version control, CI/CD pipelines, and automated testing for integration workflows
Tips for Your Remote Software Integration Engineer Job Search
Apply early to remote roles that fit
Migrate Mate lists remote software integration engineer openings from across the U.S. in one place. Search roles by the stack or sector you want, find the ones that match, and apply directly without sorting through unrelated listings.
Show your async communication in writing
Remote integration engineers exchange architecture decisions and incident post-mortems almost entirely in writing. Include a sample technical writeup or Confluence-style doc in your application materials to show you can communicate clearly without a meeting.
Build a public integration portfolio
Put at least one end-to-end integration project on GitHub, complete with a README that explains the problem, the systems connected, and the tradeoffs you made. Remote employers can't watch you work, so this becomes the evidence that you can.
Prepare for systems-design interviews over video
Remote hiring processes for integration engineers usually include a whiteboard or shared-document design session over video. Practice diagramming event-driven flows, webhook architectures, and error-handling strategies in a collaborative doc rather than on a physical whiteboard.
Remote Software Integration Engineer Jobs: Frequently Asked Questions
How do I get a remote software integration engineer job?
Target remote-first companies and distributed product teams that build on API-heavy or microservices architectures, since those environments generate the most integration work and are already built for remote collaboration. Remote employers screen heavily for async written communication, self-directed debugging, and hands-on experience with middleware, REST or SOAP APIs, and ETL pipelines. Candidates who document integration work publicly, whether through GitHub or technical writeups, have a clear edge.
Which companies hire remote software integration engineers?
Companies hiring remote software integration engineers right now include Affirm, CARIAD, and NVIDIA, based on current remote listings on Migrate Mate as of November 2026. Remote-first SaaS companies, healthcare IT vendors, and fintech platforms are especially active, as their distributed teams depend on integration engineers to connect disparate systems across multiple cloud environments.
Can you get a remote software integration engineer job with no experience?
Yes, but remote entry-level integration roles are harder to land because employers expect you to troubleshoot independently without someone nearby to ask. Early entry paths include contributing to open-source integration projects, building a portfolio of API or ETL projects with documented problem-solving, and targeting smaller remote-first startups that value demonstrated initiative. Certifications in platforms like MuleSoft or Boomi can open doors when direct experience is thin.
Do you need a degree for remote software integration engineer jobs?
Not always. Remote employers weigh practical skills and demonstrated results heavily for software integration engineers, since the work is highly technical and verifiable. A strong portfolio of API integrations, middleware configurations, or data pipeline builds often carries more weight than a diploma, particularly at remote-first companies and startups that prioritize shipping over credentials.
Which industries hire the most remote software integration engineers?
The sectors hiring the most remote software integration engineers are Banking & Financial Services, based on current remote listings on Migrate Mate as of November 2026. These sectors rely on distributed engineering teams that connect cloud platforms, third-party services, and internal systems, making remote software integration engineers a consistent hiring priority.
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