Associate Scientist Jobs in Boston, MA
Associate Scientist jobs in Boston are concentrated in the Longwood Medical Area, Kendall Square, and the Seaport District, across biopharma, biotech, and medical devices. Employers actively hiring right now include Merck, Strand Therapeutics, and Atalanta Therapeutics. Scan the live roles below and apply to whichever ones fit.
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Position
We are seeking an experienced and highly organized In Vivo Study Coordinator to own the end-to-end planning, coordination, and execution of our preclinical in vivo pharmacology programs. This is a senior, hands-on role at the intersection of scientific rigor and operational excellence — you will be the single point of accountability for study lifecycle management across multiple parallel programs, from initial study design through execution, collection, and delivery.
The ideal candidate brings deep in vivo pharmacology expertise, strong cross-functional coordination instincts, and the ability to operate independently in a fast-moving, early-stage environment. You are as comfortable building a detailed study timeline as you are troubleshooting a dosing day in real time — and you know when to push back on unrealistic timelines and when to find creative solutions.
Responsibilities
- Own end-to-end study coordination across multiple concurrent in vivo programs — from animal ordering and acclimation through dosing, bleeding, necropsy, tissue collection, and downstream handoff
- Develop and maintain detailed study plans, timelines, and execution schedules — including who does what, when, and how, with clear accountability at every step
- Serve as the primary point of contact between scientists, VIVO team members, vivarium staff, and external CROs — ensuring alignment on study design, timelines, and deliverables
- Contribute to study design in collaboration with program leads — including dose selection, group sizes, timepoints, route of administration, and endpoint strategy
- Perform and oversee hands-on in vivo procedures including dosing (IV, SC, IP, PO), bleeds, perfusion, necropsy, and tissue collection as needed
- Write, review, and refine study protocols and SOPs; contribute to protocol amendments as studies evolve
- Track and manage animal orders, reagent inventory, and study materials to ensure readiness ahead of each experiment
- Identify bottlenecks and resource conflicts across the study portfolio and proactively surface solutions
- Mentor and train junior VIVO team members on in vivo techniques and study execution best practices
- Maintain accurate, organized records and data entry in Benchling and other platforms
- Coordinate with external CROs and vendors on outsourced study components — review SOWs, monitor timelines, and ensure data quality
Required Qualifications
- Bachelor's or Master's degree in Biology, Pharmacology, Biomedical Science, or related field
- 5+ years of hands-on in vivo pharmacology experience in a biotech, pharma, or CRO environment
- Demonstrated experience as a study director, study coordinator, or study lead — owning studies end-to-end with accountability for timelines and deliverables
- Deep proficiency with in vivo techniques: IV, SC, IP, and PO dosing; submandibular and cardiac bleeds; necropsy; tissue collection and processing across a broad panel
- Experience coordinating multiple concurrent studies across different programs and timelines
- Strong organizational skills and attention to detail — you do not let things slip
- Excellent cross-functional communication — comfortable working with scientists, RAs, vivarium staff, and leadership simultaneously
- Self-motivated and capable of operating independently with minimal supervision
- A genuine passion for science and for building something impactful
Preferred Qualifications
- Experience with humanized or disease mouse models
- Familiarity with NHP study coordination and CRO management
- Experience with downstream bioanalytical assays — ELISA, MSD, qPCR, western blot, flow cytometry, IHC, IF
- Familiarity with histology, tissue sectioning, and confocal imaging workflows
- Experience with Benchling or similar LIMS platforms
- Exposure to protein therapeutics and other modalities
- Experience writing detailed study plans, SOPs, and IACUC protocol amendments
- Comfortable with data analysis tools including GraphPad Prism and Microsoft Office
Base Salary Range: $106,000 - $123,000
This reflects the typical offer range for this role, based on experience, role scope, and internal equity. Final compensation decisions are made using a consistent leveling framework and consider the candidate’s experience, interview performance, and expected impact.
This role is eligible for:
- Annual performance-based target bonus
- Stock options
- Comprehensive medical, dental, and vision coverage
- 401(k) plan
- Flexible paid time off and holidays
- Perks including on-site gym, onsite lunch, and commuter support
Our compensation ranges are reviewed annually to ensure alignment with market trends and internal equity.
If you’re excited to build a platform that combines DNA and protein multiplexing technologies, please reach out to careers@manifold.bio.
We value different experiences and ways of thinking and believe the most talented teams are built by bringing together people of diverse cultures, genders, and backgrounds.
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Who's Hiring



Top Industries Hiring
- Biotechnology & Pharmaceuticals
Associate Scientist Jobs in Boston: Frequently Asked Questions
How do I get a associate scientist job in Boston?
The strongest path into associate scientist roles in Boston runs through the Longwood Medical Area and Kendall Square, where biopharma, biotech, and cell and gene therapy companies concentrate most of their entry and junior hiring. Candidates who have hands-on lab experience in assay development, molecular biology, or analytical chemistry stand out. Targeting contract research organizations and mid-size biotech firms is practical because they hire continuously and promote from within.
Which companies hire associate scientists in Boston?
Companies currently hiring associate scientists in Boston include Merck, Strand Therapeutics, and Atalanta Therapeutics, per current listings on Migrate Mate as of September 2026. Boston's market skews heavily toward biopharma and biotech employers, ranging from large established firms in the Longwood corridor to early-stage startups clustered around Kendall Square and the Seaport.
Are there remote associate scientist jobs in Boston?
Yes, though with limits: associate scientist roles that require bench work, laboratory instrumentation, or on-site sample handling are almost entirely in-person. About 0% of associate scientist openings tied to Boston are remote or hybrid as of September 2026, and those tend to be data-heavy or regulatory affairs-adjacent positions. Bioinformatics and clinical data science tracks within Boston's research institutions offer the most flexibility.
How can I get a associate scientist job in Boston with little or no experience?
The most realistic entry path in Boston is through a co-op, research internship, or temporary lab technician role at one of the Longwood Medical Area hospitals or a Kendall Square biotech. Boston's concentration of academic medical centers and research institutes means associate-level openings regularly go to candidates with strong thesis or co-op lab experience rather than full professional records. Contract staffing firms that specialize in life sciences place a high volume of entry-level candidates across the city and are worth targeting directly.
Which industries hire the most associate scientists in Boston?
Most associate scientist openings in Boston sit in Biotechnology & Pharmaceuticals, per current listings on Migrate Mate as of September 2026. Boston's dense cluster of research hospitals, biopharma headquarters, and cell and gene therapy startups in Kendall Square and Longwood drives consistently high demand across those sectors.
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See All 43 Associate Scientist Jobs in Boston
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