IT Systems Analyst Jobs in Wisconsin
IT Systems Analyst jobs in Wisconsin are open across Madison, Milwaukee, and Stoughton and other Wisconsin metros, with employers like Collabera, Exact Sciences, and FlexTrade hiring at every experience level. Find a role that fits below and apply directly.
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Summary
The Student Information Systems (SIS) Analyst supports the configuration, administration, and ongoing operations of the Medical College of Wisconsin's student information and admissions systems within the Department of Academic Affairs. Under the guidance of the Application Systems Manager, this role provides technical application support across Banner and Slate, partners with Academic Affairs leadership and IT staff to maintain system integrations, and serves as a key resource for end user support and troubleshooting. The SIS Analyst plays an important role in ensuring the systems that drive student and applicant operations run smoothly year-round.
Primary Responsibilities
- Supports the configuration and modification of general computer applications software or specialized utility programs for the student information system (Banner): Primary for Admissions systems (Slate by Technolutions and modules, job scheduling, security set-up (provisioning/deprovisioning)); Back-up to Financial Aid and Student modules.
- Analyzes user needs and develops software solutions.
- Triaging and managing help desk tickets.
- Provides application technical support for assigned student information system modules and functions.
- Communicates with application vendors to debug, test, and resolve application failures.
- Participates in systems upgrades, modifications, and reconfigurations.
- Translates business requirements into business solutions; acts as liaison between departmental leaders, staff and information technology staff to design and configure business solutions to ensure business requirements have been met.
- Works closely with stakeholders to define business requirements and with technical staff to develop solution alternatives and actively participates in defining objectives to support changing business needs and availability.
- Coordinates IT troubleshooting and day-to-day activities within the department to ensure seamless and minimal downtime of hardware, software, and reporting requirements.
- Has knowledge and experience in the various techniques to elicit, analyze and communicate requirements within assigned functional areas.
- Establishes test plans, test cases and executes testing.
- Coordinates provisioning and deprovisioning of network accounts for students and applicants.
- Technical onboarding and offboarding of departmental staff.
- Prepares and maintains standard operating procedures and training documents.
- Assists with end user training.
- Participates in rotating on-call coverage for planned system maintenance outages, typically quarterly; outages typically do not exceed 4 hours.
- Other duties as assigned.
Knowledge – Skills – Abilities
- Knowledge of computers, electronics, digital media, databases, applications, software development, risk management, and information security.
- Customer support, systems analysis, troubleshooting, problem solving, and listening skills.
- Experience developing user training materials and training users on complex software applications.
- Working knowledge and experience with student information systems (i.e., Banner, Oracle, Slate).
- Working knowledge of ERP systems.
Schedule
Monday – Friday, 8:00 AM - 5:00 PM. However, requires occasional evening or weekend availability on a rotating team basis for planned system maintenance outages, typically quarterly.
Position Location
This is a hybrid position based at the Medical College of Wisconsin's Milwaukee campus. Candidates must be local and able to commute to campus on a variable schedule as needed.
Qualifications
Appropriate experience may be substituted for education on an equivalent basis.
Minimum Required Education: Bachelor’s degree
Minimum Required Experience: 3 years of experience
Preferred Education: IT Systems
Preferred Experience: Student Information Systems (Banner, Jenzabar)
Physical Requirements
Work requires occasionally lifting moderate weight materials, standing, or walking continuously.
Work Environment
Occasional exposure to dust, noise, temperature changes, or contact with water or other liquids. Work is performed in an environmentally controlled environment.
Sensory Acuity
Ability to detect and translate speech or other communication required. May occasionally require the ability to distinguish colors and perceive relative distances between objects.
Why MCW?
- Outstanding Healthcare Coverage, including but not limited to Health, Vision, and Dental. Along with Flexible Spending options
- 403B Retirement Package
- Competitive Vacation and Paid Holidays offered
- Tuition Reimbursement
- Paid Parental Leave
- Employee & Family Assistance Program (EFAP)
- Pet Insurance
- On campus Fitness Facility, offering onsite classes
- Additional discounted rates on items such as: Select cell phone plans, local fitness facilities, Milwaukee recreation and entertainment etc.
For a brief overview of our benefits see: Benefits Overview
For a full list of positions see: MCW Careers
At MCW all of our endeavors, from our internal operations to our interactions with our partners, are driven by our shared organizational values: Caring – Collaborative – Curiosity – Inclusive – Integrity – Respect. We are committed to fostering an inclusive environment that values diversity in backgrounds, experiences, and perspectives through merit-based processes and in alignment with all applicable laws. We believe that embracing human differences is critical to realize our vision of a healthier world, and we recognize that a healthy and thriving community starts from within. Our values define who we are, what we stand for and how we conduct ourselves at MCW. If you believe in embracing individuality and working together according to these principles to improve health for all, then MCW is the place for you. For more information, please visit our institutional website.
MCW as an Equal Opportunity Employer and Commitment to Non-Discrimination:
The Medical College of Wisconsin (MCW) is an Equal Opportunity Employer. We are committed to fostering an inclusive community of outstanding faculty, staff, and students, as well as ensuring equal educational opportunity, employment, and access to services, programs, and activities, without regard to an individual's race, color, national origin, religion, age, disability, sex, gender identity/expression, sexual orientation, marital status, pregnancy, predisposing genetic characteristic, or military status. Employees, students, applicants or other members of the MCW community (including but not limited to vendors, visitors, and guests) may not be subjected to harassment that is prohibited by law or treated adversely or retaliated against based upon a protected characteristic.
See All 13 IT Systems Analyst Jobs in Wisconsin
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Find IT Systems Analyst JobsIT Systems Analyst Jobs by City in Wisconsin
Where Wisconsin roles are concentrated, by current openings.
IT Systems Analyst Job Market in Wisconsin
A snapshot from current Wisconsin openings, updated as new roles post.
Who's Hiring
- Collabera1

- Exact Sciences1

- FlexTrade1

- Johnson Controls1

- Medical College of Wisconsin1

Top Industries Hiring
- Manufacturing5
- Technology & Software3
- Transportation & Logistics3
- Biotechnology & Pharmaceuticals1
- Construction & Real Estate1
What Wisconsin Employers Look For
The qualifications that appear most often in IT systems analyst jobs across Wisconsin.
- Bachelor's degree in information systems, computer science, or a related field
- Experience gathering, documenting, and validating business and technical requirements
- Proficiency with enterprise systems such as SAP, Oracle, or ServiceNow
- Familiarity with ITIL frameworks and IT service management processes
- Strong SQL skills for querying databases and supporting data analysis
- Project management experience or certification such as PMP or CompTIA Project+
IT Systems Analyst Jobs in Wisconsin: Frequently Asked Questions
How many IT systems analyst jobs are there in Wisconsin?
There are 13+ IT systems analyst openings in Wisconsin on Migrate Mate as of June 2026, with the most roles in Madison, Milwaukee, and Stoughton. New positions post regularly as employers across Wisconsin hire.
How much do IT systems analysts make in Wisconsin?
IT systems analysts in Wisconsin earn a median of about $100,440 a year, based on May 2025 Bureau of Labor Statistics wage data, ranging from around $66,700 for the lowest 10% to over $132,270 for the top 10%. Pay rises with experience, specialty, and employer.
Which Wisconsin cities have the most IT systems analyst jobs?
Madison, Milwaukee, and Stoughton have the most IT systems analyst openings in Wisconsin right now, with additional roles spread across smaller metros statewide.
Which companies hire IT systems analysts in Wisconsin?
Employers hiring IT systems analysts in Wisconsin include Collabera, Exact Sciences, and FlexTrade, based on current listings on Migrate Mate as of June 2026.
Are there remote IT systems analyst jobs in Wisconsin?
Yes. About 15% of IT systems analyst openings tied to Wisconsin are remote or hybrid as of June 2026. The rest are on-site roles based in Wisconsin metros.
How do I apply for IT systems analyst jobs in Wisconsin?
You can apply to IT systems analyst jobs in Wisconsin directly on Migrate Mate. Search the listings above, find roles that match your experience and preferred Wisconsin location, then apply to each one that fits.
See All 13 IT Systems Analyst Jobs in Wisconsin
Find roles in Wisconsin that match your experience and apply in just a few clicks.
Find IT Systems Analyst Jobs