Systems Analyst Jobs in San Diego, CA
Systems Analyst jobs in San Diego are concentrated in defense, biotech, and healthcare IT, with strong clusters in Kearny Mesa, Sorrento Valley, and Downtown. Employers actively hiring include Intuit, Raytheon, and Shield AI. See the openings below and apply to the ones that match your experience.
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Quick Position Facts!
- Location: San Diego, CA at our G2 Ops office and customer site.
- Work Setting: Primarily Customer Site Support with Flexible Schedule Available Based on Program Requirements.
- Salary Range: $110,000-$150,000 plus comprehensive benefits package.
- Years of Industry Experience: 6+ years of relevant experience.
- Security Clearance Requirement: Must be able to obtain and maintain Active DoD Secret Clearance.
About the Role. G2 Ops supports mission-critical defense and technology initiatives by solving complex operational and engineering challenges. We are seeking a motivated, collaborative Systems Analyst to support the Naval Information Warfare Systems Command (NAVWAR) Fleet Readiness Certification Board (FRCB) shore installation certification process.
In this role, you’ll contribute to shore installation readiness assessments, technical certification reviews, and process improvements that help the U.S. Navy make informed installation authorization decisions while working alongside a team that values innovation, technical excellence, and continuous growth.
What You’ll Do
- Evaluate shore installation task submissions through Entry Point reviews, identifying documentation gaps and assessing technical maturity, completeness, and readiness before FRCB review.
- Conduct Shore Installation Process, System Readiness Review, System Testing Review, and subsequent certification reviews to assess installation compliance and testing maturity.
- Compare installation tasks against archived baselines, identify discrepancies, and develop actionable recommendations to support Naval Information Forces (NAVIFOR) authorization decisions.
- Coordinate and communicate installation authorizations to installers, shore installation stakeholders, and affected Navy organizations.
- Participate in recurring FRCB meetings, certification planning sessions, training events, and stakeholder discussions to track actions and support timely decisions.
- Evaluate RIPTIDE and FRCB workflow tools, document technical issues, clarify requirements, and collaborate with developers and program offices to improve certification processes.
- Develop and deliver training on RIPTIDE and FRCB workflow tools for Navy program offices, Regional Shore Installation Managers, installation representatives, and other stakeholders.
- Provide technical and programmatic analysis to identify process improvements, reduce certification delays, and strengthen shore installation readiness.
What You’ll Bring
Required Qualifications
- 6+ years of relevant systems analysis, certification, installation readiness, or comparable Navy technical support experience.
- Experience supporting U.S. Navy or NAVWAR organizations, programs, or systems.
- Knowledge of Navy certification processes, shore installation activities, or shore-based systems.
- Ability to evaluate technical and programmatic submissions for maturity, completeness, compliance, and readiness.
- Ability to interpret installation documentation, identify gaps, and develop well-supported recommendations.
- Strong communication and collaboration skills, including the ability to coordinate with technical teams, program offices, installers, and government stakeholders.
- Ability to work effectively in a team-oriented environment.
- Ability to maintain an active DoD Secret security clearance throughout employment.
Preferred Qualifications
- Bachelor's degree in engineering.
- Experience supporting the FRCB or a comparable Navy installation review process.
- Experience with system testing, test readiness, or reviewing test documentation and results.
- Experience testing workflow tools, documenting technical issues, gathering requirements, or delivering technical and process training.
- Relevant advanced certifications or specialized training.
- Experience working in cross-functional or customer-facing environments.
Additional Considerations
- This is a full-time position supporting mission-focused customer environments
- Outside employment or activities must not create conflicts of interest with company or customer responsibilities
Why G2 Ops? What makes someone choose one company over another? Compensation, benefits, meaningful work, flexibility, growth opportunities, culture?
At G2 Ops, we believe you shouldn’t have to choose.
We offer competitive pay and benefits, but what truly sets us apart is our collaborative culture. Team members support mission-focused projects alongside highly skilled technical professionals across engineering, cybersecurity, operations, and program teams.
We encourage continuous learning, cross-training, and professional growth while empowering team members to contribute ideas that improve how we work and deliver value to our customers.
At G2 Ops, your contributions matter to our customers’ missions and to the continued success of our team.
Compensation & Benefits. The annual salary range for this position is $110,000 - $150,000 depending on qualifications and experience.
G2 Ops offers a competitive compensation and benefits package designed to support our employees both personally and professionally, including:
- 100% company-paid insurance for medical, dental, and vision for eligible employees and family members
- 100% company-paid insurance for life, short-term disability (STD), and long-term disability (LTD) for eligible employees
- 401(k) plan with discretionary employer matching
- 10 paid holidays
- Paid time off (PTO)
- Educational assistance
In addition, we provide professional development opportunities, performance recognition programs, and resources that support long-term career growth and work-life balance.
AI at G2 Ops. At G2 Ops, we don’t just talk about AI — we actively use it to improve how we work.
Our teams are integrating AI into engineering, cybersecurity, operations, and decision-making workflows. We continue to invest in secure AI tooling aligned with government security requirements while developing practical, mission-focused applications across the company.
Whether your role is technical or operational, you’ll have opportunities to explore how AI can enhance efficiency, innovation, and mission impact.
Work Environment. Because we support classified and mission-critical DoD programs, many roles require onsite collaboration at G2 Ops offices and/or customer locations. Depending on program requirements, telework and flexible scheduling options may be available.
We’ve built a collaborative environment where team members can learn, contribute, and grow while supporting meaningful customer missions.
Ready to Apply? If you’re excited about solving meaningful problems, working alongside talented teammates, and contributing to important mission-focused work, we’d love to hear from you.
We look forward to learning more about you
About G2 Ops, Inc. (G2 Ops)
G2 Ops leverages over a decade of experience integrating Systems, Cybersecurity, and Software Engineering techniques to provide solutions to a growing list of Government and private customers. We combine cutting edge tools with innovative engineering practices, data analytics, and risk algorithms that enhance visibility into complex infrastructures, optimizing resiliency in system design and operations.
G2 Ops is a woman-owned small business led by an executive staff known for providing innovative solutions to solve our nation’s most complex engineering challenges. G2 Ops has been named to the Inc. 5000 list of America’s fastest growing companies each of the last 9 years (2018-2026) and has locations in Arlington, VA, Virginia Beach, VA, and San Diego, CA.
G2 Ops, Inc. is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex (including pregnancy, sexual orientation, gender identity), national origin, age, disability, genetic information, protected veteran status, or any other characteristic protected by applicable federal, state, or local law.
G2 Ops, Inc. participates in the E-Verify program. Employment is contingent upon verification of identity and authorization to work in the United States.
Applicants have rights under Federal Employment Laws: https://www.dol.gov/agencies/ofccp/posters
E-Verify Participation and Right to Work Notices: https://www.e-verify.gov/employers/posters-and-resources
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See All 238+ Systems Analyst Jobs in San Diego
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Find Systems Analyst JobsSystems Analyst Job Market in San Diego
Who's Hiring
- Intuit30

- Raytheon20

- Shield AI20

- Systems Planning and Analysis, Inc. (SPA)20

- AEVEX10

Top Industries Hiring
- Technology & Software
- Fintech
Systems Analyst Jobs in San Diego: Frequently Asked Questions
How do I get a systems analyst job in San Diego?
Focus your search on San Diego's defense contractors, biotech firms, and health systems, which are the heaviest local employers of systems analysts. Jobs concentrate in Kearny Mesa, Sorrento Valley, and the Downtown core. Candidates with ERP experience, security clearance eligibility, or familiarity with clinical or laboratory systems have a clear edge in this market over generalist applicants.
Which companies hire systems analysts in San Diego?
Companies currently hiring systems analysts in San Diego include Intuit, Raytheon, and Shield AI, per current listings on Migrate Mate as of November 2026. San Diego's employer mix skews toward defense primes, life sciences companies, and large regional health networks, all of which maintain ongoing demand for systems analysts across multiple departments.
Are there remote systems analyst jobs in San Diego?
Yes, though availability depends on the role, since positions tied to classified defense work or on-site clinical systems are almost always in person. About 20% of systems analyst openings tied to San Diego are remote or hybrid as of November 2026, with the strongest remote options found in enterprise software, IT operations, and business intelligence functions.
How can I get a systems analyst job in San Diego with little or no experience?
The most realistic entry path in San Diego is through IT support or business analyst roles at local health systems like UC San Diego Health or Sharp HealthCare, which regularly hire junior analysts and promote from within. Internships with defense contractors in Kearny Mesa and entry-level roles at regional fintech and biotech firms also open the door. Proficiency in SQL and a working knowledge of ITIL or agile workflows gives candidates a practical edge at the local level.
Which industries hire the most systems analysts in San Diego?
The sectors hiring the most systems analysts in San Diego are Technology & Software and Fintech, based on current listings on Migrate Mate as of November 2026. San Diego's concentration of defense contractors, biotech research firms, and large integrated health networks creates consistent demand for analysts who can bridge technical systems with complex operational requirements.
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