Senior Researcher Jobs in San Diego, CA
Senior Researcher jobs in San Diego are in strong demand, concentrated in Torrey Pines, La Jolla, and the Sorrento Valley corridor across biotech, defense research, and academic medicine. Employers hiring right now include ASML, Intuit, and MPF Federal. Find a role that fits below and apply directly.
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MPF Federal seeks a contract Senior Laboratory Research Technician position for the Naval Health Research Center in Point Loma, San Diego. This position will perform assays and procedures in strict accordance with the laboratory Standard Operating Procedures (SOPs), Policies, Good Clinical Laboratory Practices (GCLP), accrediting bodies, and U.S. regulatory agencies to include the CAP, DoD Clinical Laboratory Information Program (CLIP), and the U.S. FDA. This individual will be responsible for preparing and analyzing biological samples utilizing advanced Next-Generation Sequencing (NGS) platforms and traditional microbiology culture techniques, the operation and maintenance of state-of-the-art instrumentation, validating genomic data prior to system entry, and ensuring absolute adherence to all quality control and biosafety procedures in support of clinical diagnostic, surveillance, and clinical studies research initiatives.
COMPENSATION RANGE: $73,500 - $78,000 annually
This position will support the Naval Health Research Center (NHRC), Operational Infectious Diseases Directorate. OID conducts ongoing, laboratory-based surveillance operations, clinical research study initiatives, and clinical diagnostic testing of U.S. military populations and key civilian cohorts operating in unique and austere environments to quantify and study the etiology of diseases of interest affecting force readiness. The program coordinates the secure transport of biological specimens and associated data from these cohorts directly to the central OID facility, where the laboratory executes high-complexity clinical diagnostics, advanced surveillance sequencing, and in-depth pathogen characterization to support active clinical studies. Actionable diagnostic results, surveillance intelligence, and clinical research findings are rapidly disseminated to key sponsors, the Armed Forces Health Surveillance Division (AFHSD), local military investigators, external collaborators, and municipal health departments to ensure timely, data-driven responses that directly safeguard both the operational readiness of U.S. Armed Forces and global public health.
Responsibilities:
- Performs highly complex laboratory assays, serving as the facility's primary bench operator for end-to-end Next-Generation Sequencing (NGS) platforms; executes laboratory procedures in strict accordance with GCLP and established procedures.
- Performs rigorous technical reviews and validates complex assay data, sequencing run metrics, and control parameters; ensures absolute adherence to all established quality procedures, safety protocols, and organizational policies before transmitting final clinical, research, or surveillance data to the Information Management System (IMS).
- Accurately records all experimental procedures, assay parameters, observations, and reagent lot numbers in real-time; adheres strictly to Good Documentation Practices (GDP) to ensure all physical laboratory notebooks, equipment logs, and electronic records remain continuously audit-ready.
- Oversees the physical maintenance of laboratory equipment, manages critical consumable and reagent inventories, and authors, reviews, and updates Standard Operating Procedures (SOPs) and technical procedures to ensure continuous operational readiness and regulatory compliance.
- Acts as the first-line escalation point for systemic assay failures, critical reagent anomalies, or advanced instrumentation errors; implements immediate Corrective and Preventive Actions (CAPAs) and coordinates high-level repairs with vendor technical support.
- Collaborates closely with the R&D division to receive newly validated translational workflows, and leads the technical onboarding, hands-on mentorship, and documented competency assessments for junior laboratory technologists in BSL-2 environments.
- Serves as the designated laboratory Subject Matter Expert (SME) on assigned clinical trials, surveillance studies, or clinical research initiatives; provides technical guidance, assay advice, and operational parameters to the research and coordination teams.
Performs other duties and responsibilities as assigned or directed by the Supervisor, including attending and participating in required training for current and new testing.
Requirements
Education and Experience
- Bachelor's Degree.
- Minimum of 5 years’ experience required.
Required Knowledge, Skills, and Abilities
- Excellent laboratory and technical skills.
- Microbiology experience required and demonstrated experience with sequencing.
- Demonstrated, extensive hands-on experience with Next-Generation Sequencing (NGS) platforms (e.g., Illumina, Oxford Nanopore) and complex library preparation workflows.
- Highly preferred experience with traditional microbiology culture techniques, including bacterial isolation, phenotypic identification, antimicrobial susceptibility testing (AST), plating, and culture maintenance.
- Ability to work independently once trained, excellent record-keeping ability, excellent interpersonal and communication skills.
- Proven ability to operate within heavily regulated environments (e.g., CAP, FDA, GCLP) and maintain meticulous, audit-ready laboratory documentation.
- Ability to identify areas for process improvement for better efficiency.
- US Citizenship and the ability to obtain and maintain a T3/Secret Clearance.
Physical Capabilities
- Lifting: Requires lifting materials up to 10 lbs.
- Ability to stand or sit at a computer for prolonged periods
Licenses and Certifications
- ASCP certification for molecular or microbiology is a plus.
Work Environment
- This position will take place primarily in a laboratory setting.
Benefits
MPF Federal is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, or protected veteran status and will not be discriminated against on the basis of disability. We offer a competitive compensation package including a competitive salary, medical benefits, PTO, holiday pay and more.
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Find Senior Researcher JobsSenior Researcher Job Market in San Diego
Who's Hiring
- ASML17

- Intuit17

- MPF Federal17

- PlayStation17

- UC San Diego17

Top Industries Hiring
- Biotechnology & Pharmaceuticals
Senior Researcher Jobs in San Diego: Frequently Asked Questions
How do I get a senior researcher job in San Diego?
San Diego's strongest hiring for senior researchers comes from its biotech and life sciences cluster in Torrey Pines and La Jolla, its defense and national security contractors in Kearny Mesa and Sorrento Valley, and its academic medical centers. Candidates with hands-on lab leadership, grant writing experience, or deep domain expertise in oncology, immunology, or materials science have the clearest edge in this market.
Which companies hire senior researchers in San Diego?
San Diego senior researcher roles are posted by ASML, Intuit, and MPF Federal and others right now, based on current listings on Migrate Mate as of August 2026. The city's employer base skews heavily toward biotech firms, defense contractors, and research hospitals, many of which maintain dedicated R&D campuses in the northern coastal corridor.
Are there remote senior researcher jobs in San Diego?
Yes, though availability depends heavily on the type of work, since hands-on lab and clinical research roles require on-site presence while policy, data, and computational research positions are far more remote-compatible. About 75% of senior researcher openings tied to San Diego are remote or hybrid as of August 2026. Roles in health economics, bioinformatics, and defense policy analysis are the most likely to offer that flexibility locally.
How can I get a senior researcher job in San Diego with little or no experience?
The most realistic entry path in San Diego is through a research associate or junior scientist role at one of the city's many biotech startups or contract research organizations, particularly those clustered around the Torrey Pines Science Park and Sorrento Mesa. These smaller firms often promote from within quickly. Volunteering on grant-funded projects through UC San Diego or the Scripps Research Institute also builds the publication record that local hiring managers look for when advancing candidates into senior roles.
Which industries hire the most senior researchers in San Diego?
The sectors hiring the most senior researchers in San Diego are Biotechnology & Pharmaceuticals, based on current listings on Migrate Mate as of August 2026. San Diego's deep concentration of biotech and pharmaceutical companies, combined with a large Navy and defense presence, creates unusually diverse research demand across both commercial and government-funded work.
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