Bioinformatics Jobs in California
Bioinformatics jobs in California represent one of the most active markets in the country, concentrated in the life sciences, biotech, pharmaceutical, and academic research sectors, with openings at every level from entry-level research associate through senior computational scientist. The greatest volume of hiring comes from the San Francisco Bay Area, San Diego, and Los Angeles, where major employers such as Genentech, Illumina, and the University of California system maintain deep bioinformatics teams. Genomics, single-cell RNA sequencing analysis, and clinical data pipeline development are among the most consistently in-demand specialties across California listings. Find a role that fits below and apply directly.
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Are you ready to make a significant impact in the field of cell therapy? In AstraZeneca's Cell Therapy division, we follow the science to explore and innovate. We are working towards treating, preventing, modifying, and even curing some of the world's most complex diseases. We have the potential to grow our pipeline and positively impact the lives of patients around the world. We are committed to making a difference and have built our business around our passion for science. Now we are fusing data and technology with the latest scientific innovations to achieve the next wave of breakthroughs.
AstraZeneca is looking for an Associate Director to join the NGS & Bioinformatics group within Cell Therapy Translational and Safety Sciences (CT-TSS). In this role, you will provide scientific and analytical leadership for bioinformatics efforts that generate translational and safety insights across our cell therapy pipeline (CAR/TCR/in vivo). Your expertise will be crucial in advancing our cell therapy programs and transforming the lives of patients.
Accountabilities
- Lead the single-cell RNA sequencing (scRNAseq)-based analyses to generate translational and safety science insights supporting the AstraZeneca cell therapy pipeline (CAR/TCR/in vivo).
- Oversee the development and optimization of bioinformatics pipelines supporting single-cell transcriptomics and multi-omic data integration.
- Apply and guide the use of AI/ML methodologies and advanced analytics to derive actionable insights from complex multi-modal datasets.
- Develop, validate, and operationalize program-specific and cross-trial computational models that integrate longitudinal multi-omic and clinical data to address defined translational questions, including response prediction, mechanism-of-action characterization, biomarker discovery, and resistance profiling.
- Lead the evaluation, adaptation, and implementation of AI foundation models for single-cell and multi-omic data, including domain-specific pretraining, fine-tuning, embedding-based representation learning, benchmarking, and deployment to support translational and safety applications across cell therapy programs.
- Guide assay development teams on NGS assay design, sequencing strategy, data quality requirements, and analytical readiness.
- Interpret and integrate complex datasets within and across programs; provide clear written and verbal updates on findings and their translational/safety implications to key stakeholders.
- Contribute to regulatory-support materials, internal strategy documents, and publication strategy, including preparation of data for presentation at internal and external scientific conferences.
- Collaborate cross-functionally with bioanalysis, clinical, data engineering, and IT teams to ensure robust data management, workflow orchestration, and compute scalability for NGS and bioinformatics workflows.
- Stay current with advancements in single-cell technologies and AI and ML-based models, and apply this knowledge to continuously improve analytical approaches.
- Mentor and provide scientific/technical guidance to junior scientists and bioinformaticians within the team.
Essential Skills/Experience
- PhD in bioinformatics, computational biology, or a related field.
- 6+ years of relevant pharmaceutical industry experience.
- Demonstrated expertise in bioinformatics and computational analysis of single-cell RNA sequencing (scRNAseq) and multi-omic datasets.
- Experience generating translational and safety science insights from genomic/transcriptomic data within Cell Therapy, immunology, or tumor biology programs.
- Deep understanding of Cell therapy Biology, immune cell phenotyping, and/or tumor biology, with up-to-date knowledge of analytical methods applicable to characterization of cell therapy products and their mechanism of action.
- Deep familiarity with bioinformatics pipelines for single-cell and immune-profiling datasets.
- Proficiency in programming languages such as Python and R, with experience building and maintaining analytical pipelines.
- Experience with cloud computing environments and high-performance computing clusters for scalable data processing.
- Background in applying AI/ML models to biological data, including prediction, feature extraction, and integrative multi-omic analytics.
- Solid understanding of statistics and their application to biomedical science and clinical data.
- Working knowledge of FAIR data principles, structured metadata, and harmonized data practices.
- Exceptional ability to interpret and communicate complex datasets verbally, in writing, and in presentations, adapting to scientific, clinical, and executive audiences.
- Ability to work cross-functionally and collaboratively with project stakeholders, and to prioritize multiple projects concurrently in a fast-paced environment.
The annual base pay (or hourly rate of compensation) for this position ranges from $142,377 - $213,566 USD. Our positions offer eligibility for various incentives—an opportunity to receive short-term incentive bonuses, equity-based awards for salaried roles and commissions for sales roles. Benefits offered include qualified retirement programs, paid time off (i.e., vacation, holiday, and leaves), as well as health, dental, and vision coverage in accordance with the terms of the applicable plans.
Date Posted
30-Oct-2026Closing Date
Our mission is to build an inclusive environment where equal employment opportunities are available to all applicants and employees. In furtherance of that mission, we welcome and consider applications from all qualified candidates, regardless of their protected characteristics. If you have a disability or special need that requires accommodation, please complete the corresponding section in the application form.
See All 35 Bioinformatics Jobs in California
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Find Bioinformatics JobsBioinformatics Jobs by City in California
Where California roles are concentrated, by current openings.
Bioinformatics Job Market in California
A snapshot from current California openings, updated as new roles post.
Who's Hiring



Top Industries Hiring
- Biotechnology & Pharmaceuticals
- Medical Devices
- Technology & Software
- Non-Profit & Social Services
- Healthcare & Medical Services
What California Employers Look For
The qualifications that appear most often in bioinformatics jobs across California.
- Advanced degree in bioinformatics, computational biology, genomics, or a closely related field
- Proficiency in Python, R, or Perl for genomic data analysis and pipeline development
- Experience with next-generation sequencing data processing tools such as GATK, STAR, or Bowtie
- Familiarity with high-performance computing environments and cloud platforms such as AWS or Google Cloud
- Knowledge of statistical methods for genomics, including differential expression and variant calling
- Experience working in a regulated biotech, pharma, or clinical research environment preferred
Bioinformatics Jobs in California: Frequently Asked Questions
How do you become a bioinformatics in California?
Most bioinformatics positions in California require at least a master's degree, with doctoral degrees expected for senior research roles at biotech and academic institutions. California does not have a state-issued license for bioinformaticians, so hiring decisions center on demonstrated computational skills, published research or project portfolios, and domain expertise in genomics or proteomics. Candidates coming from computational biology, statistics, or computer science programs at UC San Diego, UCSF, UC Berkeley, or UCLA are well positioned for the California market.
How much do bioinformaticses make in California?
Bioinformaticses in California earn a median of about $113,530 a year, based on May 2025 Bureau of Labor Statistics wage data, ranging from around $69,770 for the lowest 10% to over $189,710 for the top 10%. Pay rises with experience, specialty, and employer.
Which companies hire bioinformaticss in California?
Employers hiring bioinformaticss in California right now include Illumina, Abbott, and QIAGEN, based on current listings on Migrate Mate as of November 2026. California's dense concentration of biotech and pharmaceutical companies, particularly around San Diego's Torrey Pines corridor and the Bay Area's Mission Bay district, means consistent demand across both early-stage startups and large established research organizations.
Which California cities have the most bioinformatics jobs?
The California cities with the most bioinformatics openings are San Diego, San Francisco, and La Jolla. The San Francisco Bay Area leads because of its concentration of major biotech headquarters and UCSF research centers, San Diego follows closely due to the large cluster of genomics and pharmaceutical companies anchored around the Torrey Pines Mesa, and Los Angeles draws demand from research hospitals, UCLA, and a growing biotech corridor.
Are there remote bioinformatics jobs in California?
Yes, and more than most fields. About 75% of bioinformatics openings tied to California are remote or hybrid as of November 2026, reflecting the largely computational nature of the work. Pipeline development, data analysis, and software engineering tasks within bioinformatics translate well to remote settings, while roles that require direct wet lab coordination or on-site HPC cluster access are more likely to be fully in-person.
How can I get hired as a bioinformatics in California with little or no experience?
The most realistic entry path is a research associate or junior bioinformatics analyst role, often posted by California biotech companies as an explicit new-graduate position. Large employers such as Genentech, Illumina, and the UC Health system run rotational research programs and co-op pipelines that accept candidates with a strong undergraduate thesis or capstone project in computational biology. Building a public GitHub portfolio demonstrating NGS data workflows and contributing to open-source genomics tools strengthens applications significantly for California hiring managers who review code before interviewing.
Where can I find and apply to bioinformatics jobs in California?
You can find and apply to bioinformatics jobs in California on Migrate Mate, which lists current openings tied to California employers. Search the listings below to see roles that match your background, then apply directly to the ones that fit.
See All 35 Bioinformatics Jobs in California
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