Remote Systems Integration Specialist Jobs
Remote Systems Integration Specialist jobs are in active demand across the U.S., with remote-first firms and distributed engineering teams hiring specialists to connect enterprise systems, APIs, and middleware without an office requirement. Companies bringing on remote systems integration specialists right now include IQVIA, Legrand, and ONENERGY, working across sectors like defense contracting, healthcare IT, fintech, and cloud infrastructure. Scan the live roles below and apply to whichever ones fit.
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Senior Business Systems Analyst / Programmer – Rhapsody Integration Engine, .NET & Public Health Data Systems
Job Title: Business Systems Analyst / Programmer
Location: Idaho – Fully Remote
Work Arrangement: Remote
Employment Type: Temporary / Contract
Duration: November 30, 2026 – November 30, 2027
Position Overview
We are seeking an experienced Business Systems Analyst / Programmer to support, maintain, and modernize existing applications and data integration infrastructure.
The ideal candidate will have strong hands-on experience with the Rhapsody Integration Engine, Integrated Disease Surveillance Systems (IDSS), SQL development, and .NET technologies. This position will focus on maintaining public health data exchange workflows, troubleshooting existing applications, supporting system integrations, and contributing to the modernization of legacy systems.
The resource will work with internal teams and external partners to maintain reliable data exchange processes, improve system performance, and support public health surveillance infrastructure.
This role requires a combination of technical development, systems analysis, requirements gathering, troubleshooting, and process improvement experience.
Required Skills / Experience
Minimum 3 years of experience with Rhapsody Integration Engine, including interface development, message transformation, and troubleshooting.
Minimum 3 years of SQL development and troubleshooting experience.
Minimum 3 years of requirements analysis, including interpreting user needs and translating them into functional specifications.
Minimum 3 years of critical thinking and complex problem-solving experience.
Minimum 2 years of process optimization experience, identifying inefficiencies and recommending improvements to workflows or systems.
Proficiency in C# and .NET Framework.
Experience supporting .NET applications and Windows-based infrastructure.
Experience with Windows OS troubleshooting and technical support.
Experience developing and maintaining PowerShell scripts for automation and maintenance.
Ability to support public health data exchange systems and workflows.
Ability to participate in technical planning, architectural discussions, and system modernization initiatives.
Preferred Skills / Experience
2 years of experience with eCR (Electronic Case Reporting).
2 years of experience with ELR (Electronic Laboratory Reporting).
2 years of experience with Azure DevOps.
2 years of experience with HL7 or FHIR standards.
1 year of experience with IIS configuration and management.
1 year of experience with Windows Server administration.
Knowledge of NBS/NEDSS systems and workflows.
Experience with Oracle PL/SQL.
Familiarity with TFS (Team Foundation Server).
Experience with SMTP and SFTP protocols.
Understanding of public health messaging vocabularies and clinical coding systems, including LOINC, SNOMED, and ICD-10-CM.
Job Responsibilities
Application Development and Infrastructure Support
Support and troubleshoot existing .NET applications and Windows-based infrastructure.
Develop, maintain, and troubleshoot scripts and tools using PowerShell and SQL.
Support Windows Server environments and IIS-related configurations.
Assist with application maintenance, upgrades, and technical improvements.
Public Health Data Exchange and Integration
Manage and optimize data exchange processes between external organizations, internal public health teams, and the CDC.
Configure, monitor, and troubleshoot interfaces using the Rhapsody Integration Engine.
Maintain and enhance HL7 message routing, transformations, and mappings.
Support and troubleshoot the NEDSS Base System (NBS).
Implement system upgrades and new functionality/modules, including pages.
Maintain supporting systems such as NBS Utilities and the ELR data store.
Coordinate with external partners, including the CDC, hospitals, and laboratories.
Support public health data exchange workflows and ensure reliable data movement between connected systems.
Systems Modernization and Technical Analysis
Assist with planning and providing strategic direction for modernization initiatives involving legacy systems and data integration.
Evaluate and recommend modern technologies and tools to improve disease surveillance and data infrastructure.
Collaborate with internal teams to assess existing architecture and recommend improvements.
Participate in daily and weekly planning and architectural discussions.
Analyze user requirements and translate business needs into functional specifications.
Identify workflow inefficiencies and recommend process improvements.
Documentation and Project Support
Prepare technical documentation and provide knowledge transfer to internal staff.
Support ongoing system maintenance and troubleshooting activities.
Track all project time using 7pace Timetracker.
Ideal Candidate
The ideal candidate is a technically strong Business Systems Analyst / Programmer with hands-on experience in Rhapsody Integration Engine and public health data integration environments.
They should understand how healthcare and public health organizations exchange information using integration engines and messaging standards. Experience with NBS/NEDSS, ELR, eCR, HL7, and FHIR will be particularly valuable.
The candidate should also have strong SQL and .NET development capabilities, experience troubleshooting Windows-based applications and infrastructure, and the ability to participate in technical modernization discussions.
A successful candidate will be analytical, proactive, comfortable working with internal and external stakeholders, and capable of maintaining critical data exchange systems while helping modernize legacy technology.
Senior Business Systems Analyst / Programmer – Rhapsody Integration Engine, .NET & Public Health Data Systems
Job Title: Business Systems Analyst / Programmer
Location: Idaho – Fully Remote
Work Arrangement: Remote
Employment Type: Temporary / Contract
Duration: November 30, 2026 – November 30, 2027
Position Overview
We are seeking an experienced Business Systems Analyst / Programmer to support, maintain, and modernize existing applications and data integration infrastructure.
The ideal candidate will have strong hands-on experience with the Rhapsody Integration Engine, Integrated Disease Surveillance Systems (IDSS), SQL development, and .NET technologies. This position will focus on maintaining public health data exchange workflows, troubleshooting existing applications, supporting system integrations, and contributing to the modernization of legacy systems.
The resource will work with internal teams and external partners to maintain reliable data exchange processes, improve system performance, and support public health surveillance infrastructure.
This role requires a combination of technical development, systems analysis, requirements gathering, troubleshooting, and process improvement experience.
Required Skills / Experience
Minimum 3 years of experience with Rhapsody Integration Engine, including interface development, message transformation, and troubleshooting.
Minimum 3 years of SQL development and troubleshooting experience.
Minimum 3 years of requirements analysis, including interpreting user needs and translating them into functional specifications.
Minimum 3 years of critical thinking and complex problem-solving experience.
Minimum 2 years of process optimization experience, identifying inefficiencies and recommending improvements to workflows or systems.
Proficiency in C# and .NET Framework.
Experience supporting .NET applications and Windows-based infrastructure.
Experience with Windows OS troubleshooting and technical support.
Experience developing and maintaining PowerShell scripts for automation and maintenance.
Ability to support public health data exchange systems and workflows.
Ability to participate in technical planning, architectural discussions, and system modernization initiatives.
Preferred Skills / Experience
2 years of experience with eCR (Electronic Case Reporting).
2 years of experience with ELR (Electronic Laboratory Reporting).
2 years of experience with Azure DevOps.
2 years of experience with HL7 or FHIR standards.
1 year of experience with IIS configuration and management.
1 year of experience with Windows Server administration.
Knowledge of NBS/NEDSS systems and workflows.
Experience with Oracle PL/SQL.
Familiarity with TFS (Team Foundation Server).
Experience with SMTP and SFTP protocols.
Understanding of public health messaging vocabularies and clinical coding systems, including LOINC, SNOMED, and ICD-10-CM.
Job Responsibilities
Application Development and Infrastructure Support
Support and troubleshoot existing .NET applications and Windows-based infrastructure.
Develop, maintain, and troubleshoot scripts and tools using PowerShell and SQL.
Support Windows Server environments and IIS-related configurations.
Assist with application maintenance, upgrades, and technical improvements.
Public Health Data Exchange and Integration
Manage and optimize data exchange processes between external organizations, internal public health teams, and the CDC.
Configure, monitor, and troubleshoot interfaces using the Rhapsody Integration Engine.
Maintain and enhance HL7 message routing, transformations, and mappings.
Support and troubleshoot the NEDSS Base System (NBS).
Implement system upgrades and new functionality/modules, including pages.
Maintain supporting systems such as NBS Utilities and the ELR data store.
Coordinate with external partners, including the CDC, hospitals, and laboratories.
Support public health data exchange workflows and ensure reliable data movement between connected systems.
Systems Modernization and Technical Analysis
Assist with planning and providing strategic direction for modernization initiatives involving legacy systems and data integration.
Evaluate and recommend modern technologies and tools to improve disease surveillance and data infrastructure.
Collaborate with internal teams to assess existing architecture and recommend improvements.
Participate in daily and weekly planning and architectural discussions.
Analyze user requirements and translate business needs into functional specifications.
Identify workflow inefficiencies and recommend process improvements.
Documentation and Project Support
Prepare technical documentation and provide knowledge transfer to internal staff.
Support ongoing system maintenance and troubleshooting activities.
Track all project time using 7pace Timetracker.
Ideal Candidate
The ideal candidate is a technically strong Business Systems Analyst / Programmer with hands-on experience in Rhapsody Integration Engine and public health data integration environments.
They should understand how healthcare and public health organizations exchange information using integration engines and messaging standards. Experience with NBS/NEDSS, ELR, eCR, HL7, and FHIR will be particularly valuable.
The candidate should also have strong SQL and .NET development capabilities, experience troubleshooting Windows-based applications and infrastructure, and the ability to participate in technical modernization discussions.
A successful candidate will be analytical, proactive, comfortable working with internal and external stakeholders, and capable of maintaining critical data exchange systems while helping modernize legacy technology.
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Find JobsRemote Systems Integration Specialist Job Market
Who's Hiring
Top Industries Hiring
- Education
- Science & Research
- Technology & Software
What Employers Look For
The qualifications that appear most often in remote systems integration specialist jobs.
- Experience designing and implementing REST or SOAP APIs between enterprise systems
- Proficiency with at least one iPaaS or ESB platform such as MuleSoft, Boomi, or Azure Integration Services
- Hands-on knowledge of data mapping, transformation formats such as JSON and XML, and EDI standards
- Bachelor's degree in computer science, information systems, or a related technical field
- Familiarity with ERP systems such as SAP or Oracle and their integration interfaces
- Experience working in Agile project environments with cross-functional development and operations teams
Tips for Your Remote Systems Integration Specialist Job Search
Apply early to remote roles that fit
Migrate Mate lists remote systems integration specialist openings from across the U.S. in one place, so you can find roles that match your stack and apply directly without sifting through location-restricted postings mixed in with the results.
Document your integration projects with outcomes
Remote hiring managers can't watch you work, so your project record does the convincing. Describe each integration you built or maintained by what systems it connected, what problem it solved, and what measurably improved, whether that's uptime, data latency, or error rates.
Demonstrate async communication before the interview
Remote systems integration roles depend on written clarity when a quick desk conversation isn't possible. Write your outreach, follow-up emails, and cover letter the way you'd write a technical handoff note: precise, structured, and actionable without requiring back-and-forth to understand.
Show fluency with remote integration toolchains
Call out the specific platforms you've used, including iPaaS tools like MuleSoft or Boomi, API gateways, monitoring tools like Datadog or Splunk, and ticketing systems like Jira. Remote teams need specialists who can plug in without needing someone nearby to explain the stack.
Remote Systems Integration Specialist Jobs: Frequently Asked Questions
How do I get a remote systems integration specialist job?
Target companies that run distributed engineering teams, particularly in cloud infrastructure, healthcare IT, and defense contracting, since those sectors hire systems integration specialists remotely most consistently. Remote employers screen heavily for self-direction, clear written communication, and hands-on experience with integration platforms, middleware, and API frameworks. Candidates who document past integration projects with concrete outcomes and show comfort working asynchronously across time zones have a clear edge over equally qualified applicants who present only credentials.
Which companies hire remote systems integration specialists?
Remote systems integration specialist roles are posted by IQVIA, Legrand, and ONENERGY and others right now, based on current remote listings on Migrate Mate as of November 2026. The companies hiring most actively tend to be remote-first technology firms, large government contractors, and distributed healthcare IT organizations that depend on cross-system data flow across geographically separated teams.
Can you get a remote systems integration specialist job with no experience?
Yes, but remote entry-level roles are harder to land because employers expect you to troubleshoot integration failures independently from day one without in-person support. Cloud-native startups and smaller SaaS companies occasionally hire junior systems integration specialists remotely. Candidates who can show a completed integration project, a home lab demonstrating API or middleware work, or a relevant certification give hiring managers concrete evidence of capability when a full work history isn't available.
Do you need a degree for remote systems integration specialist jobs?
Not always. Many remote employers care more about demonstrated integration skills than a specific credential, particularly when candidates can show real project work involving APIs, ETL pipelines, or enterprise middleware. A degree in computer science, information systems, or engineering helps with larger enterprises and government contractors, but hands-on results and familiarity with integration platforms like MuleSoft, Dell Boomi, or Azure Logic Apps often carry more weight in remote hiring decisions.
Which industries hire the most remote systems integration specialists?
Remote systems integration specialist roles concentrate in Education, Science & Research, and Technology & Software, based on current remote listings on Migrate Mate as of November 2026. Those sectors rely on distributed teams that need specialists to maintain data flow between systems spread across different locations, vendors, and cloud environments without requiring on-site presence.
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