Clinical Analyst Jobs in San Francisco, CA
Clinical Analyst jobs in San Francisco draw from a dense cluster of health systems, digital health companies, and life sciences firms concentrated in Mission Bay, the Financial District, and SoMa, with demand running steadily across payers, providers, and health tech. Employers hiring right now include Precision Medicine, Citi, and Biogen. See the openings below and apply to the ones that match your experience.
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Job Summary:
Please note: A cover letter is required, there are two openings available, and the position requires onsite work two days per week.
Reporting to the Director of Clinical Finance, the Clinical Finance Analyst leverages advanced financial expertise and strong organizational skills to support the growth of the clinical finance enterprise, including outreach sites. This role is responsible for managing financial operations, enhancing productivity, and providing strategic insights to clinical leadership. Key responsibilities include developing and managing annual financial budgets; overseeing financial portfolios and monitoring performance across assigned divisions; reconciling clinical FTE allocations and ensuring accurate distribution; redistributing clinical revenue based on the clinical transactions report (DART) and labor & delivery shifts. Generate and monitor clinical productivity reports monthly. Identify opportunities to improve productivity and increase fund flow revenue. Provide financial modeling and scenario analysis to support new program development. Collaborate with the Division Chiefs, Division Analysts, Director of Clinical Finance (supervisor), and UC Health counterparts to develop an annual clinical volume budget under tight timelines. Conduct coding audits for cost centers and providers to improve billing accuracy and compliance. Prepare profit-and-loss statements for providers and support financial decision-making.
Department:
The Department of Obstetrics, Gynecology and Reproductive Sciences (Ob, Gyn & RS) is a major academic Department in the School of Medicine, engaged in clinical, research and training activities at the Parnassus, Mount Zion, and Zuckerberg San Francisco General Hospital campuses, the new Betty Irene Moore Women’s Hospital at Mission Bay, as well as satellite locations throughout the Bay Area, with an annual operating budget of $150 million. The Department has 134 full-time faculty, 117 other academic appointees, 13 post-doctoral fellows, 22 clinical fellows, 32 residents, 138 voluntary clinical faculty and 270 staff.
The mission of the Department of Obstetrics, Gynecology & Reproductive Sciences is to improve the lives and health of all women through excellence, innovation and leadership in patient care, scientific discovery, education, advocacy, and diversity, equity and inclusion. We are committed to providing quality health care services; educating health care providers and investigators; and conducting research to advance knowledge in our field.
Reasonable accommodation(s) to qualified individuals with disabilities are available as part of the application and interview processes. If you would like to request accommodations, please contact the recruiter or hiring manager. If workplace accommodations are needed after a job offer is made, please contact the supervisor and/or Disability Management Services (DMS) at (415) 476-2621 to initiate the interactive process.
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Find Clinical Analyst JobsClinical Analyst Job Market in San Francisco
Who's Hiring
- Precision Medicine2

- Citi1

- Biogen1

- Stantec1

- JPMorganChase1

Top Industries Hiring
- Biotechnology & Pharmaceuticals4
- Education3
- Banking & Financial Services3
- Healthcare & Medical Services3
- Investment & Asset Management3
Clinical Analyst Jobs in San Francisco: Frequently Asked Questions
How do I get a clinical analyst job in San Francisco?
Focus your search on San Francisco's three dominant hiring sectors: health systems anchored in Mission Bay and Parnassus, payer and managed care organizations in the Financial District, and the city's growing health tech corridor in SoMa. Candidates who combine clinical data fluency with familiarity in Epic or Cerner have a clear edge locally. Targeting academic medical centers, digital health startups, and regional health plans gives you the widest set of openings in this market.
Which companies hire clinical analysts in San Francisco?
Employers hiring clinical analysts in San Francisco right now include Precision Medicine, Citi, and Biogen, based on current listings on Migrate Mate as of June 2026. The local market mixes large academic health systems and integrated delivery networks with a dense layer of venture-backed digital health and health IT companies unique to the Bay Area.
Are there remote clinical analyst jobs in San Francisco?
Yes, though it depends on the role: desk-based work such as data analysis, reporting, and system configuration is routinely remote, while implementation support and clinical operations roles typically require on-site presence. About 55% of clinical analyst openings tied to San Francisco are remote or hybrid as of June 2026. Health tech and payer-side roles in this market tend to offer the most scheduling flexibility.
How can I get a clinical analyst job in San Francisco with little or no experience?
The most realistic entry path in San Francisco is a junior or associate analyst role at one of the city's health IT vendors or mid-size digital health startups, which hire earlier-career candidates more readily than large academic systems. Roles such as clinical systems coordinator, EHR support specialist, or data coordinator frequently serve as the local stepping stone. A background in health informatics, nursing, or clinical operations combined with any hands-on Epic or Cerner exposure stands out strongly with San Francisco-area employers.
Which industries hire the most clinical analysts in San Francisco?
Most clinical analyst openings in San Francisco sit in Biotechnology & Pharmaceuticals, Education, and Banking & Financial Services, per current listings on Migrate Mate as of June 2026. San Francisco's position as a hub for both established health systems and early-stage digital health companies keeps demand across those sectors consistently higher here than in most other U.S. cities.
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