Quality Control Microbiologist Jobs
Quality Control Microbiologist jobs are open across pharmaceutical, food and beverage, biotech, and contract manufacturing industries, from entry-level technician roles to senior scientist and QC manager positions, with specializations in environmental monitoring, sterility testing, and microbial identification. Find a role that fits from the openings below and apply directly.
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Job Overview
Ascend Advanced Therapies is seeking a Quality Control Microbiologist Supervisor to perform testing in compliance with QMS policies and procedures, company standards, and applicable regulatory requirements, including GMP, safety, and environmental requirements.
Key Responsibilities:
· Perform testing in compliance with QMS policies and procedures, company standards, and applicable regulatory requirements, including GMP, safety, and environmental requirements.
· Support laboratory startup, qualification activities, and Environmental Monitoring Performance Qualification (EMPQ) studies for manufacturing and support areas.
· Perform routine environmental and utility monitoring activities, including sampling, testing, troubleshooting, and investigation of atypical results.
· Conduct microbiological testing of drug substance, drug product, environmental monitoring, and utility samples in accordance with approved procedures and regulatory requirements.
· Perform routine monitoring, sampling, and testing of Water for Injection (WFI) systems to ensure compliance with established specifications and site monitoring programs.
· Ability to perform work while fully gowned within the clean room environment of the gene therapy production facility. To include environmental and utility monitoring including operational and personnel monitoring during aseptic processing and aseptic filling.
· Perform microbiological assays, including bioburden, endotoxin, mycoplasma, sterility, pharmaceutical water testing and gas testing.
· Support onboarding, qualification, and lifecycle management of laboratory equipment and GMP software systems.
· Purchase all necessary supplies needed for QC Microbiology. Author item number and material specifications documents and order supplies. Receive supplies, log-in and store appropriately according to written procedures
· Perform growth promotion analyses on all microbiological media lots received. Report results on appropriate forms and review results of peers
· Inspect and clean the laboratory and its equipment on a regular basis.
· Record all necessary information and maintain current, accurate, legible records of all work performed. Report problems to management.
· Author and review QC documents, method validation documents, test methods and results, and summary reports, quarterly and annual reports, for compliance with testing specifications and procedures.
· Track, trend, analyze, and present Environmental Monitoring data via report and presentations of Change Controls, Deviations, Investigations and CAPAs and evaluating their potential impact on analytical results and product quality.
· Completes and authors reports for various risk assessments related to QC Micro activities related to individual products and processes.
· Lead, compose, and present environmental monitoring action committee slides and material on a monthly basis.
· Supporting tech transfer of microbiological methods into QC.
· Maintaining an up-to-date knowledge of the new and emerging regulations related to QC Facilities and operations.
· Ensuring a safe work environment.
· Support the development, qualification, validation, and implementation of microbiological development assays when directed by the QC Microbiology Director.
· Ensure compliance to all quality requirements to meet audit standards and regulatory compliance.
· Assist in training staff on methods and related SOPs.
· Lead, participate in, and coordinate risk assessments and EMPQ activities for manufacturing areas to include: setting up labs, performing EMPQ's, constant monitoring & trouble shooting.
· Perform sample management tasks, including labelling, shipping to external labs, inventory and disposal of samples.
· Author and maintain critical site documentation including site contamination control strategy, environmental monitoring program and utility monitoring program.
· Effectively communicates and presents department activities via quarterly quality metric review meeting.
· Provide support for other duties, as assigned by management.
· Approve employee timesheets and conduct performance evaluations and performance management activities.
· Excellent written, verbal, organizational, and interpersonal communication skills.
· Demonstrated ability to work independently, manage multiple priorities, and collaborate effectively in a cross-functional GMP environment.
Educational Qualifications
· Required: Bachelor's degree in Biology, Microbiology, Biotechnology, Biochemistry, Molecular Biology, Chemical Engineering, Biomedical Engineering, or another related scientific discipline.
· Master's degree in a scientific discipline, preferred.
Additional Qualifications
· Minimum of five (5) years of relevant experience in QC Microbiology, Microbiology, Biologics Manufacturing, Cell Therapy, Gene Therapy, Pharmaceutical Manufacturing, or a related GMP-regulated environment.
Physical Requirements
☒ medium work (< 50 lbs.) ☐ heavy work (< 100 lbs.)
Physical activity:
☒ repetitive motion ☒ balancing ☒ stooping ☒ lifting
☐ climbing ☒ kneeling/crouching ☐ crawling ☒ reaching
☒ standing ☒ typing/grasping ☒ walking ☒ pushing/pulling
· Visual acuity (preparing/analyzing data, transcribing, reading, use of measuring devices, machinery labels, color differentiation, etc.)
· Working conditions (indoor/outdoor, noise levels, hazards, working quarters)
Travel Requirements (0%)
Supervisor Responsibilities
· This position requires previous supervisory experience.
US FDA Code of Federal Regulations (CFR) 21
Benefits:
- 401(k)
- 401(k) matching
- Dental insurance
- Employee assistance program
- Flexible spending account
- Health insurance
- Health savings account
- Life insurance
- Paid time off
- Parental leave
- Retirement plan
- Vision insurance
Application Question(s):
- Will you now or in the future require employer sponsorship for employment visa status?
- Do you have at least 5 years of experience in a GMP-regulated biologics, cell therapy, gene therapy, or pharmaceutical environment?
- Do you have experience reviewing or approving GMP quality documentation such as batch records, deviations, CAPAs, change controls, specifications, or product release documentation?
- Do you have experience hosting or supporting FDA, client, or regulatory inspections?
- Do you have experience working in a gene therapy, cell therapy, biologics, vaccine, or CDMO environment?
Education:
- Bachelor's (Preferred)
Experience:
- GMP biologics, cell therapy, or gene therapy quality: 5 years (Required)
Work Location: In person
Quality Control Microbiologist Jobs by Experience Level
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Find JobsQuality Control Microbiologist Job Market
Who's Hiring



Top Industries Hiring
- Food & Beverage
What Employers Look For
The qualifications that appear most often in quality control microbiologist jobs.
- Bachelor's degree in microbiology, biology, or a closely related life science field
- Hands-on experience working in a GMP-regulated laboratory environment
- Proficiency with microbial identification methods including gram staining and MALDI-TOF
- Familiarity with environmental monitoring programs and cleanroom sampling protocols
- Experience writing, reviewing, or executing standard operating procedures and batch records
- Knowledge of FDA regulations, USP chapters, and laboratory investigation documentation requirements
Tips for Your Quality Control Microbiologist Job Search
Tailor your resume to GMP environments
Hiring managers in QC microbiology scan for GMP compliance experience fast. List specific regulations you've worked under, such as FDA 21 CFR Part 211, and name the SOPs you've authored or followed rather than describing responsibilities in general terms.
Highlight instruments and software by name
Employers filter resumes for tools like LIMS, bioMérieux VITEK, MALDI-TOF, and plate readers. If you've used them, name each one explicitly in your skills section rather than grouping them under vague terms like 'laboratory equipment' or 'microbiology platforms.'
Apply early to roles that fit
Migrate Mate lists quality control microbiologist openings from across the United States in one place, so you can find roles that match and apply directly to each listing.
Prepare deviations and OOS investigations stories
Interviewers at pharma and biotech companies routinely ask how you've handled out-of-specification results or laboratory investigations. Walk through a real example using the CAPA framework: what failed, how you investigated, what corrective action you recommended, and what the outcome was.
Search by product type not just job title
QC microbiology roles in sterile injectables, dietary supplements, and food production have different regulatory drivers and day-to-day methods. Filtering your search by industry vertical or product category helps you find openings where your specific lab background is directly relevant.
Ask about release testing ownership in interviews
One question that signals real experience: ask whether the QC team owns batch release decisions or acts in an advisory role. The answer tells you how much independent judgment the job requires, and it shows interviewers you understand the regulatory accountability structure of the role.
Quality Control Microbiologist Jobs: Frequently Asked Questions
Which companies are hiring the most quality control microbiologists?
The companies hiring the most quality control microbiologists right now include Orca Bio, Eli Lilly, and Lief Labs, with the largest share of openings in California, Florida, and Indiana, based on current listings on Migrate Mate as of August 2026. Contract development and manufacturing organizations, large pharmaceutical manufacturers, and food safety labs account for a significant portion of active hiring.
How many quality control microbiologist jobs are remote?
About 0% of quality control microbiologist openings are fully remote or hybrid as of August 2026, which is low relative to most science roles because the work is inherently hands-on. The sub-areas most likely to allow partial remote work are QC documentation review, data trending, and regulatory writing positions rather than bench-level testing roles.
How do you become a quality control microbiologist?
Start with a bachelor's degree in microbiology, biology, or a related life science. Build hands-on lab skills through internships, co-ops, or entry-level QC technician roles in a regulated industry such as pharma or food manufacturing. Learn GMP principles early, get comfortable with environmental monitoring and microbial identification methods, and seek exposure to CAPA processes and deviation documentation to move into scientist-level roles.
Can you get a quality control microbiologist job with little or no experience?
Yes, many employers hire QC microbiologist technicians or associates with a relevant degree and strong academic lab skills. Emphasize coursework in microbiology techniques, any GMP training certificates you've completed, and any internship or research lab experience that involved aseptic technique, plating, or sterility testing. Entry-level roles in food manufacturing or contract labs often have lower experience requirements than pharmaceutical companies and can serve as a strong starting point.
What does the quality control microbiologist interview process look like?
Most processes start with a recruiter or HR screen focused on your background and availability. A hiring manager interview follows, covering your GMP experience, familiarity with specific methods, and how you've handled laboratory deviations or out-of-specification results. Some employers include a technical panel with QC leads or a lab tour. Final rounds may involve a presentation on a past project or a competency-based interview with quality and operations managers.
Where can I find and apply to quality control microbiologist jobs?
You can find and apply to quality control microbiologist jobs on Migrate Mate, which lists current openings from across the United States in one place. Search the listings to find roles that match your experience, industry background, and location preferences, then apply directly to each one that fits.
See All 7 Quality Control Microbiologist Jobs
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