Systems Engineer Jobs in Annapolis Junction, MD
Systems Engineer jobs in Annapolis Junction are concentrated in the National Security Campus corridor and surrounding Howard County tech centers, with defense contractors, intelligence community vendors, and federal IT services firms leading hiring. Employers bringing on systems engineers right now include Captivation Software, Columbia Technology Partners, and Nyla Technology Solutions. See the openings below and apply to the ones that match your experience.
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Build to something to be proud of.
Captivation has built a reputation on providing customers exactly what is needed in a timely manner. Our team of engineers take pride in what they develop and constantly innovate to provide the best solution. Captivation is looking for software developers who can get stuff done while making a difference in support of the mission to protect our country.
Description
Captivation Software is looking for a mid level systems engineer who will support the full lifecycle of enterprise infrastructure solutions across mission-critical environments, including design, development, integration, modernization, operations, and sustainment. This position will leverage Python development, containerization technologies, and Docker to automate processes, deploy scalable solutions, and improve system reliability and operational efficiency. The engineer will collaborate with Government stakeholders and technical teams to solve complex engineering challenges and deliver secure, high-quality solutions aligned with mission objectives.
Responsibilities
- Maintain Python-based automation tools, scripts, and engineering solutions supporting enterprise and mission systems.
- Maintain containerized applications and services using Docker and related container technologies.
- Support the integration, configuration, troubleshooting, and sustainment of containerized solutions across Linux-based enterprise environments.
- Automate system deployment, configuration, monitoring, and operational processes to improve infrastructure reliability and efficiency.
- Apply systems engineering principles throughout the lifecycle, including requirements analysis, design, integration, testing, deployment, operations, and maintenance.
- Analyze system performance and technical issues and recommend solutions for modernization, scalability, reliability, and performance improvements.
- Collaborate with Government stakeholders and cross-functional engineering teams to resolve technical issues, document solutions, and deliver quality engineering products.
Requirements
Security Clearance:
- Must currently hold a Top Secret/SCI U.S. Government security clearance with a favorable Polygraph, therefore all candidates must be a U.S. citizen
Minimum Qualifications:
- Bachelor's Degree in related technical discipline required.
- Ten (10) years of systems engineering experience
- IAT level II baseline certification as defined by DoD 8570.01-M
Desired Skills:
- Experience with Kubernetes, or other container orchestration platforms.
- Experience developing or maintaining CI/CD pipelines for containerized applications.
- Familiarity with Git/GitLab, Jenkins, Ansible, or similar DevSecOps and automation tools.
- Experience with REST APIs, Python-based GUI frameworks, dashboards, or data visualization tools.
- Knowledge of Bill of Materials (BOM) integration, configuration management, and software/container dependency management.
This position is open for direct hires only. We will not consider candidates from third party staffing/recruiting firms.
Benefits
- Annual Salary: $130,000 - $270,000 (Depends on the Years of Experience)
- Up to 20% 401k contribution (No Matching Required and Vested from Day 1)
- Above Market Hourly Rates
- $3,600 HSA Contribution
- 6 Weeks Paid Time Off
- Company Paid Employee Medical/Dental/Vision Insurance/Life Insurance/Short-Term & Long-Term Disability/AD&D
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Find Systems Engineer JobsSystems Engineer Job Market in Annapolis Junction
Who's Hiring
- Captivation Software35
- Columbia Technology Partners30

- Nyla Technology Solutions20

- 2HB Incorporated15

- Markon10

Systems Engineer Jobs in Annapolis Junction: Frequently Asked Questions
How do I get a systems engineer job in Annapolis Junction?
Focus your search on the defense and intelligence technology contractors that anchor the Annapolis Junction market, particularly those supporting signals intelligence, cybersecurity, and mission systems along the Route 32 corridor near Fort Meade. Candidates with an active security clearance, experience in systems integration or CONOPS development, and familiarity with DoD acquisition frameworks have a clear edge over the general applicant pool in this specific market.
Which companies hire systems engineers in Annapolis Junction?
Companies currently hiring systems engineers in Annapolis Junction include Captivation Software, Columbia Technology Partners, and Nyla Technology Solutions, per current listings on Migrate Mate as of September 2026. The local employer mix skews heavily toward cleared defense contractors and intelligence community support firms tied to nearby federal facilities.
Are there remote systems engineer jobs in Annapolis Junction?
Yes, though the opportunity is limited given how many systems engineer roles in Annapolis Junction require on-site access to classified facilities or secure networks. About 38% of systems engineer openings tied to Annapolis Junction are remote or hybrid as of September 2026, and those tend to be in requirements analysis, documentation, or modeling and simulation work that does not require a cleared facility.
How can I get a systems engineer job in Annapolis Junction with little or no experience?
The most realistic entry path in Annapolis Junction is through a junior systems engineer or systems analyst role with a mid-size cleared contractor that supports the intelligence or defense community. Local employers often recruit from engineering programs at nearby universities and through internship pipelines tied to federal programs. Obtaining even a Secret clearance before applying, pursuing a CompTIA Security+ certification, and targeting roles with titles like associate systems engineer or systems engineer I will open more doors locally.
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