Medical Director Jobs in San Diego, CA

Medical Director jobs in San Diego are active across health systems, biotechnology, managed care, and behavioral health, with roles concentrated in Kearny Mesa, Torrey Pines, and the Sorrento Valley corridor. Employers hiring right now include Neurocrine Biosciences, UC San Diego, and DESORT STAFFING. Scan the live roles below and apply to whichever ones fit.

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Overview

Open roles322+
Top employerNeurocrine Biosciences
Work type55% On-site
Top credentialDoctorate
Companies hiring18

Showing 5 of 322+ Medical Director jobs

C
Medical Director - Physician
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C
Added 1w ago
Medical Director - Physician
Clinica Medica De La Mora Inc,
San Diego, California
Clinical Support
Healthcare Administration
Human Resources
On-Site

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Family Health Centers of San Diego
Assistant Medical Director, Psychiatry
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Family Health Centers of San Diego
Added 1w ago
Assistant Medical Director, Psychiatry
Family Health Centers of San Diego
San Diego, California
Corporate Training
Educational Administration
Learning & Development
$270k - $424k/yr
CPR Certification
1,001-5,000

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Neurocrine Biosciences
Director, Medical Affairs Excellence
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Neurocrine Biosciences
Added 1w ago
Director, Medical Affairs Excellence
Neurocrine Biosciences
San Diego, California
Project & Program Management
Strategy & Corporate Development
Human Resources
Compliance & Legal
Project Management
Business Strategy
$207k - $282k/yr
On-Site
Master's

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Neurocrine Biosciences
Senior Medical Director, Clinical Development
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Neurocrine Biosciences
Added 1w ago
Senior Medical Director, Clinical Development
Neurocrine Biosciences
San Diego, California
Clinical Support
Healthcare Administration
Medical Specialists
$301k - $411k/yr
On-Site
Doctorate

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Neurocrine Biosciences
Executive Medical Director
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Neurocrine Biosciences
Added 1w ago
Executive Medical Director
Neurocrine Biosciences
San Diego, California
Clinical Trials & Medical Research
Healthcare Administration
Medical Specialists
Nursing
Clinical Trials
$323k - $440k/yr
On-Site
Doctorate

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See All 322+ Medical Director Jobs in San Diego

Find roles in San Diego that match your experience and apply in just a few clicks.

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Medical Director Job Market in San Diego

Who's Hiring

  • Neurocrine Biosciences
    Neurocrine Biosciences54
  • UC San Diego
    UC San Diego27
  • DESORT STAFFING
    DESORT STAFFING27
  • Travere Therapeutics
    Travere Therapeutics27
  • Abbott
    Abbott13

Top Industries Hiring

  • Biotechnology & Pharmaceuticals
  • Healthcare & Medical Services

Medical Director Jobs in San Diego: Frequently Asked Questions

How do I get a medical director job in San Diego?

Focus on San Diego's strongest hiring sectors: health systems, biotech and life sciences companies, managed care organizations, and behavioral health networks. Roles concentrate in Kearny Mesa, Sorrento Valley, Mission Valley, and the Torrey Pines research corridor. Candidates with utilization management, population health, or clinical operations experience stand out locally, as do those who can bridge clinical leadership with the business priorities common in San Diego's large employer base.

Which companies hire medical directors in San Diego?

Employers hiring medical directors in San Diego right now include Neurocrine Biosciences, UC San Diego, and DESORT STAFFING, based on current listings on Migrate Mate as of August 2026. San Diego's mix of large health systems, regional health plans, and biotech and pharmaceutical companies creates steady demand for medical directors with both clinical and operational backgrounds.

Are there remote medical director jobs in San Diego?

Yes, though availability depends heavily on the role type. Medical directors in utilization management, quality assurance, and health plan operations are far more likely to work remotely than those in hospital or clinic leadership, which require on-site presence. About 45% of medical director openings tied to San Diego are remote or hybrid as of August 2026. Managed care and telehealth-adjacent roles in San Diego tend to offer the most scheduling flexibility.

How can I get a medical director job in San Diego with little or no experience?

The most realistic entry path is moving into a medical director role from a senior clinical or department head position within one of San Diego's large health systems or regional medical groups. Employers like federally qualified health centers and community health organizations in underserved areas of the county often offer physician leadership development tracks. Building experience in quality improvement committees, utilization review, or clinical program management locally makes the transition more direct.

Which industries hire the most medical directors in San Diego?

San Diego medical director roles concentrate in Biotechnology & Pharmaceuticals and Healthcare & Medical Services, based on current listings on Migrate Mate as of August 2026. San Diego's large biotech and life sciences cluster, combined with its major health systems and regional health plans, drives consistent demand for medical directors across both clinical and corporate settings.

See All 322+ Medical Director Jobs in San Diego

Find roles in San Diego that match your experience and apply in just a few clicks.

Find Medical Director Jobs