Remote Integration Analyst Jobs
Remote integration analyst jobs are active across the U.S. at remote-first companies and distributed teams in sectors like healthcare, financial services, and enterprise software. Employers hiring remotely right now include Lockheed Martin, GovCIO, and reveleer. See the openings below and apply to the ones that match your experience.
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Senior Business Systems Analyst / Programmer – Rhapsody Integration Engine, .NET & Public Health Data Systems
Job Title: Business Systems Analyst / Programmer
Location: Idaho – Fully Remote
Work Arrangement: Remote
Employment Type: Temporary / Contract
Duration: November 30, 2026 – November 30, 2027
Position Overview
We are seeking an experienced Business Systems Analyst / Programmer to support, maintain, and modernize existing applications and data integration infrastructure.
The ideal candidate will have strong hands-on experience with the Rhapsody Integration Engine, Integrated Disease Surveillance Systems (IDSS), SQL development, and .NET technologies. This position will focus on maintaining public health data exchange workflows, troubleshooting existing applications, supporting system integrations, and contributing to the modernization of legacy systems.
The resource will work with internal teams and external partners to maintain reliable data exchange processes, improve system performance, and support public health surveillance infrastructure.
This role requires a combination of technical development, systems analysis, requirements gathering, troubleshooting, and process improvement experience.
Required Skills / Experience
Minimum 3 years of experience with Rhapsody Integration Engine, including interface development, message transformation, and troubleshooting.
Minimum 3 years of SQL development and troubleshooting experience.
Minimum 3 years of requirements analysis, including interpreting user needs and translating them into functional specifications.
Minimum 3 years of critical thinking and complex problem-solving experience.
Minimum 2 years of process optimization experience, identifying inefficiencies and recommending improvements to workflows or systems.
Proficiency in C# and .NET Framework.
Experience supporting .NET applications and Windows-based infrastructure.
Experience with Windows OS troubleshooting and technical support.
Experience developing and maintaining PowerShell scripts for automation and maintenance.
Ability to support public health data exchange systems and workflows.
Ability to participate in technical planning, architectural discussions, and system modernization initiatives.
Preferred Skills / Experience
2 years of experience with eCR (Electronic Case Reporting).
2 years of experience with ELR (Electronic Laboratory Reporting).
2 years of experience with Azure DevOps.
2 years of experience with HL7 or FHIR standards.
1 year of experience with IIS configuration and management.
1 year of experience with Windows Server administration.
Knowledge of NBS/NEDSS systems and workflows.
Experience with Oracle PL/SQL.
Familiarity with TFS (Team Foundation Server).
Experience with SMTP and SFTP protocols.
Understanding of public health messaging vocabularies and clinical coding systems, including LOINC, SNOMED, and ICD-10-CM.
Job Responsibilities
Application Development and Infrastructure Support
Support and troubleshoot existing .NET applications and Windows-based infrastructure.
Develop, maintain, and troubleshoot scripts and tools using PowerShell and SQL.
Support Windows Server environments and IIS-related configurations.
Assist with application maintenance, upgrades, and technical improvements.
Public Health Data Exchange and Integration
Manage and optimize data exchange processes between external organizations, internal public health teams, and the CDC.
Configure, monitor, and troubleshoot interfaces using the Rhapsody Integration Engine.
Maintain and enhance HL7 message routing, transformations, and mappings.
Support and troubleshoot the NEDSS Base System (NBS).
Implement system upgrades and new functionality/modules, including pages.
Maintain supporting systems such as NBS Utilities and the ELR data store.
Coordinate with external partners, including the CDC, hospitals, and laboratories.
Support public health data exchange workflows and ensure reliable data movement between connected systems.
Systems Modernization and Technical Analysis
Assist with planning and providing strategic direction for modernization initiatives involving legacy systems and data integration.
Evaluate and recommend modern technologies and tools to improve disease surveillance and data infrastructure.
Collaborate with internal teams to assess existing architecture and recommend improvements.
Participate in daily and weekly planning and architectural discussions.
Analyze user requirements and translate business needs into functional specifications.
Identify workflow inefficiencies and recommend process improvements.
Documentation and Project Support
Prepare technical documentation and provide knowledge transfer to internal staff.
Support ongoing system maintenance and troubleshooting activities.
Track all project time using 7pace Timetracker.
Ideal Candidate
The ideal candidate is a technically strong Business Systems Analyst / Programmer with hands-on experience in Rhapsody Integration Engine and public health data integration environments.
They should understand how healthcare and public health organizations exchange information using integration engines and messaging standards. Experience with NBS/NEDSS, ELR, eCR, HL7, and FHIR will be particularly valuable.
The candidate should also have strong SQL and .NET development capabilities, experience troubleshooting Windows-based applications and infrastructure, and the ability to participate in technical modernization discussions.
A successful candidate will be analytical, proactive, comfortable working with internal and external stakeholders, and capable of maintaining critical data exchange systems while helping modernize legacy technology.
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Who's Hiring



Top Industries Hiring
- Technology & Software
What Employers Look For
The qualifications that appear most often in remote integration analyst jobs.
- Bachelor's degree in computer science, information systems, or a related technical field
- Hands-on experience with integration platforms such as MuleSoft, Dell Boomi, or Azure Logic Apps
- Proficiency in REST and SOAP API design, testing, and troubleshooting
- Working knowledge of SQL and the ability to query and transform relational data
- Experience with HL7, FHIR, or EDI standards for roles in healthcare or supply chain
- Strong written communication skills for producing integration specifications and data mapping documentation
Tips for Your Remote Integration Analyst Job Search
Apply early to remote roles that fit
Migrate Mate lists remote integration analyst openings from across the U.S. in one place. Search roles that match your integration stack and experience level, then apply directly before postings fill. Remote roles often close faster than on-site ones.
Document your integration projects in writing
Remote employers evaluate your async communication before they hire you. Write clear summaries of integrations you've built, the systems connected, and the business problem solved. A brief project write-up signals exactly the documentation habit remote teams depend on.
Prove platform fluency before the interview
Remote integration analyst interviews go deeper on tools because there's no pair-programming session to fall back on. Be ready to walk through your hands-on experience with platforms like MuleSoft, Dell Boomi, Azure Logic Apps, or Workato, including how you tested and handled errors independently.
Prepare for asynchronous technical screens
Many remote employers send take-home integration scenarios instead of live coding rounds. Practice mapping data flows, writing transformation logic, and explaining your decisions in writing. Clear, well-commented work product matters as much as the correct answer.
Remote Integration Analyst Jobs: Frequently Asked Questions
How do I get a remote integration analyst job?
Target remote-first companies and distributed teams that already run their integration workflows across time zones, because they hire for self-direction from day one. Remote employers screen for async written communication, documentation habits, and hands-on experience with integration platforms like MuleSoft, Boomi, or Azure Logic Apps. A portfolio showing end-to-end integration projects you owned independently gives you a clear edge.
Which companies hire remote integration analysts?
Remote integration analyst roles are posted by Lockheed Martin, GovCIO, and reveleer and others right now, based on current remote listings on Migrate Mate as of November 2026. Remote-first firms, distributed enterprise software teams, and companies in healthcare IT and financial services are among the most consistent hirers of this role.
Can you get a remote integration analyst job with no experience?
Yes, but remote entry-level integration analyst roles are harder to land because employers expect you to troubleshoot independently without an in-office team nearby. Smaller SaaS companies and consulting firms are more open to entry-level remote candidates. Showing hands-on integration work through personal projects, certifications on platforms like MuleSoft or Boomi, and strong written communication skills can open doors without a full work history.
Do you need a degree for remote integration analyst jobs?
Not always. Many remote employers care more about demonstrated experience with integration platforms, APIs, and data mapping than a specific degree. Candidates who can show working integrations, relevant certifications, and clear technical documentation often compete equally with degree holders. A computer science or information systems degree helps, but it isn't a firm requirement at most remote-first companies.
Which industries hire the most remote integration analysts?
Remote integration analyst roles concentrate in Technology & Software, based on current remote listings on Migrate Mate as of November 2026. These sectors rely on distributed teams that connect disparate systems across regions, making remote integration work a natural fit for how they operate.
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