Senior Application Analyst Jobs in New York
Senior Application Analyst jobs in New York place candidates in one of the most active technology hiring markets in the country, with demand concentrated in financial services, healthcare, and enterprise software across every seniority level from associate analyst through principal. New York City, Albany, and Buffalo are the largest hiring centers, anchored by employers like JPMorgan Chase, NewYork-Presbyterian, and IBM. The most sought-after specializations are ERP systems administration, clinical application support, and enterprise resource planning implementation. Find a role that fits below and apply directly.
Find JobsOverview
Showing 5 of 19+ Senior Application Analyst jobs
Job Title: EHR Application Analyst - Senior
Department: PFS Applications
Location: Hybrid (Onsite & Remote) Riedman Remote,100 Kings Highway South, Rochester, NY 14617
Hours Per Week: 40
Schedule: Typically, 8am -4:30pm
POSITION SUMMARY:
The EHR Application Analyst Senior serves as an advanced-level contributor in the support, optimization, and ongoing development of the Electronic Health Record (EHR) systems. Operating with a high degree of independence, this role handles complex technical issues, leads system optimization efforts, and serves as a resource and mentor for junior analysts. The EHR Application Analyst Senior applies deep knowledge of EHR capabilities and healthcare business workflows to drive improvements that enhance clinical and operational performance.
KEY RESPONSIBILITIES:
Advanced System Support and Maintenance:
- Serve as a primary escalation point for complex technical issues and system errors, applying advanced troubleshooting techniques to ensure timely resolution and minimal disruption to patient care.
- Provide day-to-day technical support to end-users, including troubleshooting issues, answering questions, and resolving system errors to ensure uninterrupted use of the EHR system.
- Provide guidance to junior analysts on day-to-day support challenges, sharing expertise and building team capability.
- Lead and coordinate routine maintenance activities, including software updates, patches, and upgrades, to ensure the stability and security of the EHR system.
- Coordinate testing and validation activities for system changes, enhancements, and upgrades, ensuring new features meet functional requirements without introducing unintended disruptions.
- Participate in on-call rotations, including taking lead responsibility for after-hours coverage on complex or escalated issues.
System Optimization:
- Lead efforts to optimize the performance, usability, and efficiency of the EHR system.
- Conduct workflow assessments with operational partners to identify build inefficiencies and improvement opportunities.
- Develop and advance optimization requests through appropriate governance and change management channels.
- Apply cross-application integration knowledge to identify dependencies and ensure cohesive system performance across modules.
Collaboration and Vendor Engagement:
- Take ownership of defined work streams or components within EHR implementation projects, system upgrades, and other initiatives.
- Coordinate task assignments, track progress, and communicate status to project leads, ensuring deliverables are completed on time and within scope.
- Own ongoing relationships with EHR vendor support, including managing open support requests, evaluating release notes for operational impact, and representing the organization in user group sessions and advisory forums.
- Coordinate with cross-functional teams - including IT, clinicians, administrators, and vendors - to support EHR initiatives and facilitate effective communication across stakeholder groups.
Documentation and Knowledge Management:
- Maintain comprehensive documentation of system configurations, processes, and procedures.
- Establish knowledge-sharing practices to ensure critical information is accessible and current across the team.
Training and Mentorship:
- Provide training and mentorship to junior analysts and end-users, sharing best practices to enhance team capabilities and support continuous professional development.
Compliance and Data Privacy
- Handle all protected health information (PHI) in accordance with HIPAA regulations and organizational data privacy and security policies.
- Complete required compliance training and model information security best practices for the team.
PREFERRED QUALIFICATIONS:
- Excellent analytical, organization, and verbal communication skills.
- Ability to work independently and within teams.
- Ability to solve complex problems and understand translate customer needs into system solutions.
- Strong understanding of healthcare business process, workflows, and terminology.
- Cross-application integration knowledge.
- Proficient in Microsoft 365 or equivalent productivity tools.
- Degree in Computer Science, healthcare or related field.
REQUIRED QUALIFICATIONS:
- Minimum two (2) to five (5) years of experience as an EHR Application Analyst, Health IT Analyst, Epic Analyst, or in a related healthcare information systems role.
LICENSURE/CERTIFICATIONS:
- Current Epic Certification.
EDUCATION:
LICENSES / CERTIFICATIONS:
PHYSICAL REQUIREMENTS:
Light - Light non-clinical roles include frequent standing or walking and minimal lifting, typically under 20 lbs. Tasks often involve sitting at a workstation, using a computer, handling paperwork, and interacting with colleagues or visitors. Fine motor control is essential for typing and administrative tasks, while clear vision and hearing support accurate communication. Emotional and cognitive demands include managing multiple tasks, handling interruptions, and exercising independent judgment. Environmental exposures are generally low but may include shared workspaces, proximity to clinical areas, or occasional crowding.For disease specific care programs refer to the program specific requirements of the department for further specifications on experience and educational expectations, including continuing education requirements.
Any physical requirements reported by a prospective employee and/or employee’s physician or delegate will be considered for accommodations.
PAY RANGE:
$90,000.00 - $98,000.00CITY:
POSTAL CODE:
The posted pay range is a good faith representation of potential base pay for this position. It may be modified in the future and eligible for additional pay components. Individual annual salaries/hourly rates could vary based on position details and FTE. Pay is determined by considering factors including, but not limited to, experience, relevant qualifications, specialty, internal equity, locations, and contracts.
Rochester Regional Health is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, creed, religion, sex (including pregnancy, childbirth, and related medical conditions), sexual orientation, gender identity or expression, national origin, age, disability, predisposing genetic characteristics, marital or familial status, military or veteran status, citizenship or immigration status, or any other characteristic protected by federal, state, or local law.
Job Title: EHR Application Analyst - Senior
Department: PFS Applications
Location: Hybrid (Onsite & Remote) Riedman Remote,100 Kings Highway South, Rochester, NY 14617
Hours Per Week: 40
Schedule: Typically, 8am -4:30pm
POSITION SUMMARY:
The EHR Application Analyst Senior serves as an advanced-level contributor in the support, optimization, and ongoing development of the Electronic Health Record (EHR) systems. Operating with a high degree of independence, this role handles complex technical issues, leads system optimization efforts, and serves as a resource and mentor for junior analysts. The EHR Application Analyst Senior applies deep knowledge of EHR capabilities and healthcare business workflows to drive improvements that enhance clinical and operational performance.
KEY RESPONSIBILITIES:
Advanced System Support and Maintenance:
- Serve as a primary escalation point for complex technical issues and system errors, applying advanced troubleshooting techniques to ensure timely resolution and minimal disruption to patient care.
- Provide day-to-day technical support to end-users, including troubleshooting issues, answering questions, and resolving system errors to ensure uninterrupted use of the EHR system.
- Provide guidance to junior analysts on day-to-day support challenges, sharing expertise and building team capability.
- Lead and coordinate routine maintenance activities, including software updates, patches, and upgrades, to ensure the stability and security of the EHR system.
- Coordinate testing and validation activities for system changes, enhancements, and upgrades, ensuring new features meet functional requirements without introducing unintended disruptions.
- Participate in on-call rotations, including taking lead responsibility for after-hours coverage on complex or escalated issues.
System Optimization:
- Lead efforts to optimize the performance, usability, and efficiency of the EHR system.
- Conduct workflow assessments with operational partners to identify build inefficiencies and improvement opportunities.
- Develop and advance optimization requests through appropriate governance and change management channels.
- Apply cross-application integration knowledge to identify dependencies and ensure cohesive system performance across modules.
Collaboration and Vendor Engagement:
- Take ownership of defined work streams or components within EHR implementation projects, system upgrades, and other initiatives.
- Coordinate task assignments, track progress, and communicate status to project leads, ensuring deliverables are completed on time and within scope.
- Own ongoing relationships with EHR vendor support, including managing open support requests, evaluating release notes for operational impact, and representing the organization in user group sessions and advisory forums.
- Coordinate with cross-functional teams - including IT, clinicians, administrators, and vendors - to support EHR initiatives and facilitate effective communication across stakeholder groups.
Documentation and Knowledge Management:
- Maintain comprehensive documentation of system configurations, processes, and procedures.
- Establish knowledge-sharing practices to ensure critical information is accessible and current across the team.
Training and Mentorship:
- Provide training and mentorship to junior analysts and end-users, sharing best practices to enhance team capabilities and support continuous professional development.
Compliance and Data Privacy
- Handle all protected health information (PHI) in accordance with HIPAA regulations and organizational data privacy and security policies.
- Complete required compliance training and model information security best practices for the team.
PREFERRED QUALIFICATIONS:
- Excellent analytical, organization, and verbal communication skills.
- Ability to work independently and within teams.
- Ability to solve complex problems and understand translate customer needs into system solutions.
- Strong understanding of healthcare business process, workflows, and terminology.
- Cross-application integration knowledge.
- Proficient in Microsoft 365 or equivalent productivity tools.
- Degree in Computer Science, healthcare or related field.
REQUIRED QUALIFICATIONS:
- Minimum two (2) to five (5) years of experience as an EHR Application Analyst, Health IT Analyst, Epic Analyst, or in a related healthcare information systems role.
LICENSURE/CERTIFICATIONS:
- Current Epic Certification.
EDUCATION:
LICENSES / CERTIFICATIONS:
PHYSICAL REQUIREMENTS:
Light - Light non-clinical roles include frequent standing or walking and minimal lifting, typically under 20 lbs. Tasks often involve sitting at a workstation, using a computer, handling paperwork, and interacting with colleagues or visitors. Fine motor control is essential for typing and administrative tasks, while clear vision and hearing support accurate communication. Emotional and cognitive demands include managing multiple tasks, handling interruptions, and exercising independent judgment. Environmental exposures are generally low but may include shared workspaces, proximity to clinical areas, or occasional crowding.For disease specific care programs refer to the program specific requirements of the department for further specifications on experience and educational expectations, including continuing education requirements.
Any physical requirements reported by a prospective employee and/or employee’s physician or delegate will be considered for accommodations.
PAY RANGE:
$90,000.00 - $98,000.00CITY:
POSTAL CODE:
The posted pay range is a good faith representation of potential base pay for this position. It may be modified in the future and eligible for additional pay components. Individual annual salaries/hourly rates could vary based on position details and FTE. Pay is determined by considering factors including, but not limited to, experience, relevant qualifications, specialty, internal equity, locations, and contracts.
Rochester Regional Health is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, creed, religion, sex (including pregnancy, childbirth, and related medical conditions), sexual orientation, gender identity or expression, national origin, age, disability, predisposing genetic characteristics, marital or familial status, military or veteran status, citizenship or immigration status, or any other characteristic protected by federal, state, or local law.
See All 19 Senior Application Analyst Jobs in New York
Find roles in New York that match your experience and apply in just a few clicks.
Find JobsSenior Application Analyst Jobs by City in New York
Where New York roles are concentrated, by current openings.
Senior Application Analyst Job Market in New York
A snapshot from current New York openings, updated as new roles post.
Who's Hiring
What New York Employers Look For
The qualifications that appear most often in senior application analyst jobs across New York.
- Bachelor's degree in information systems, computer science, or a closely related field
- Five or more years of experience supporting enterprise applications in a professional environment
- Hands-on proficiency with ERP or clinical application platforms such as Epic, PeopleSoft, or SAP
- Demonstrated ability to gather requirements, document workflows, and translate business needs into system configurations
- Experience coordinating upgrades, patches, and testing cycles with cross-functional technology and business teams
- Strong communication skills for presenting technical findings to non-technical stakeholders and senior leadership
Senior Application Analyst Jobs in New York: Frequently Asked Questions
How do you become a senior application analyst in New York?
Most senior application analyst roles in New York require a bachelor's degree in information systems, computer science, or business administration paired with several years of progressively responsible application support experience. New York does not issue a state license specific to this role, so advancement depends on building expertise in enterprise platforms, earning vendor credentials such as Epic certification or SAP certifications, and accumulating experience managing full project lifecycles in complex organizations like financial institutions, hospital networks, or large government agencies.
How much do senior application analysts make in New York?
Senior application analysts in New York earn a median of about $109,610 a year, based on May 2025 Bureau of Labor Statistics wage data, ranging from around $67,220 for the lowest 10% to over $171,360 for the top 10%. Pay rises with experience, specialty, and employer.
Which companies hire senior application analysts in New York?
Employers hiring senior application analysts in New York right now include Genpact, Citi, and KWI, based on current listings on Migrate Mate as of October 2026. New York's concentration of major financial institutions, integrated health systems, and state government agencies makes it one of the most consistent markets for this role year-round.
Which New York cities have the most senior application analyst jobs?
New York, Bronx, and Jamaica account for the largest share of senior application analyst openings in New York. New York City drives the majority of demand through its dense concentration of financial services firms, large hospital networks, and corporate headquarters, while Albany's government agencies and Buffalo's growing healthcare and manufacturing sectors generate steady regional hiring.
Are there remote senior application analyst jobs in New York?
Yes, and more than most fields. Senior application analysts work primarily with software systems, documentation, and remote stakeholders, making the role well suited to distributed arrangements. About 100% of senior application analyst openings tied to New York are remote or hybrid as of October 2026, with fully remote positions most common in ERP administration and enterprise software support roles that do not require on-site hardware access.
How can I get hired as a senior application analyst in New York with little or no experience?
The most realistic entry path is a junior or associate application analyst position, where New York employers such as large hospital networks, state agencies, and financial services firms regularly onboard candidates with a relevant degree and foundational technical aptitude. Roles like help desk analyst, business systems coordinator, or IT support specialist at New York institutions provide the platform exposure that hiring managers look for. Earning a vendor credential in Epic, Salesforce, or a comparable enterprise system gives early-career candidates a concrete edge in a competitive market.
Where can I find and apply to senior application analyst jobs in New York?
You can find and apply to senior application analyst jobs in New York on Migrate Mate, which lists current openings across New York City, Albany, Buffalo, and other markets in the state. Find roles that fit your background and apply directly to each employer through the listings on the platform.
See All 19 Senior Application Analyst Jobs in New York
Find roles in New York that match your experience and apply in just a few clicks.
Find Jobs