Systems Engineer Jobs in Wisconsin
Systems Engineer jobs in Wisconsin are concentrated in Milwaukee, Madison, and the Fox Valley corridor, where manufacturers, defense contractors, and technology firms maintain strong engineering teams. Rockwell Automation, Oshkosh Corporation, and Johnson Controls are among the most consistent Wisconsin employers of systems engineers, with openings across industrial automation, embedded systems, and defense systems integration at every level from entry-level associate to principal engineer. Demand is especially steady for engineers with controls, SCADA, and model-based systems design backgrounds. See the openings below and apply to the ones that match your experience.
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At Accuray, we make a direct and powerful impact on the lives of cancer patients every day — helping them live longer, better lives. But our commitment to innovation offers a truly unique opportunity: the chance to change the fight against cancer — helping to develop, introduce and support new treatment delivery systems and software that will give new hope and new health to cancer patients and cancer survivors around the world.
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Job Description
SUMMARY
Systems Engineers at Accuray analyze, design, develop and test medical device systems to ensure the integration of hardware, software, reliability, regulatory compliance, and safety requirements. A Systems Engineering Compliance Engineer (or just Compliance Engineer) serves as a contributing member of the Systems Engineering team, specifically responsible for maintaining product compliance with global regulatory and safety standards, such as the IEC 60601 family of standards.
As Senior Compliance Engineer, this position is expected to lead submissions, responses, and issue resolution with notified bodies, including CE Mark and NRTL approvals. They also lead by instituting compliance management best practices and lead others in compliance related activities. This role serves as a bridge between systems engineering and compliance, translating regulatory and safety requirements into system requirements, architecture decisions, risk controls, and verification activities.
REPORTING TO/DEPARTMENT
Reports to the Director, Systems Engineering in the Systems & Applied Science department
ESSENTIAL DUTIES AND RESPONSIBILITIES
Regulatory & Certification Management
Maintain product compliance with global regulatory and safety standards, including CE Mark and NRTL approvals.
Plan, coordinate, and oversee compliance testing activities with external test labs and certification bodies.
Lead submissions, responses, and issue resolution with notified bodies and regulatory agencies.
Support regulatory filings and product registrations through technical documentation and compliance justifications.
Design for Compliance & Safety
Provide input to system and subsystem requirements to ensure alignment with IEC, EN, UL, and other applicable standards.
Evaluate system architectures and design solutions to ensure compliance requirements are appropriately allocated across hardware, software, and subsystems.
Oversee implementation of safety features across electrical, mechanical, software, and system-level designs.
Own safety-related design aspects including insulation coordination, creepage/clearance, environmental robustness, and user interaction safety.
Drive compliance considerations through requirements reviews, design reviews, and architecture reviews.
Risk Management & Systems Engineering
Lead risk management activities including FMEA, hazard analysis, and fault tree analysis in accordance with ISO 14971.
Translate compliance and risk findings into clear, testable engineering requirements.
Ensure traceability between regulatory requirements, risk controls, system requirements, and verification activities.
Collaborate with systems engineers to incorporate hazards, risk controls, and compliance requirements into system architecture and verification strategies.
Standards Monitoring & Implementation
Monitor changes in global regulatory and safety standards and assess impacts to existing and future products.
Develop and execute implementation plans for new or revised standards.
Serve as a subject matter expert on medical electrical equipment standards, including the IEC 60601 family.
Cross-Functional Collaboration
Partner with Quality, Regulatory, Manufacturing, and Engineering teams to ensure compliant and manufacturable designs.
Support internal audits, external inspections, and remediation efforts.
Mentor engineers and promote best practices in compliance and systems engineering.
Documentation & Compliance Support
Develop and maintain technical documentation required for regulatory submissions and audits.
Support investigation and resolution of nonconformances, deviations, and field issues related to safety or compliance.
REQUIRED QUALIFICATIONS
Bachelor's degree in electrical engineering, systems engineering, or related field.
7+ years of experience in medical device, healthcare technology, or similarly regulated industries.
Demonstrated expertise with IEC 60601-1 and applicable collateral and particular standards.
Direct experience obtaining CE Mark and/or NRTL approvals for complex electromechanical systems.
PREFERRED QUALIFICATIONS
Advanced degree in electrical engineering, systems engineering, or related field.
Experience working within ISO 13485 and FDA Quality System Regulation environments.
Familiarity with global regulatory frameworks including EU MDR and FDA submissions.
Experience working directly with notified bodies and certification agencies.
Experience translating regulatory and safety requirements into engineering requirements and design inputs.
Strong knowledge of risk management methodologies including FMEA, hazard analysis, and fault tree analysis.
Experience developing or managing system-level requirements, traceability, verification planning, and design reviews.
Experience supporting multidisciplinary product development programs.
Understanding of embedded systems, firmware interactions, and system architecture principles.
Strong troubleshooting, technical writing, and cross-functional communication skills.
WORKING CONDITIONS
Indoor Environment: The position takes place indoors, providing a comfortable and climate-controlled workspace.
Physical Demands: This role may involve standing or walking for extended periods of time, requires manual dexterity and the ability to handle delicate, high-value equipment. Ability to lift and carry equipment or materials required.
Work Schedule: Standard working hours are Monday through Friday; however, evening, weekend or other work outside normal business hours and overtime may be required.
Computer Usage: Proficiency with computers, including software applications and communication tools, is essential for tasks and collaboration.
Personal Protective Equipment: Must wear appropriate personal protective equipment (PPE) and ahere to safety protocols and cleanliness standards.
To qualify for this position, candidates must be able to furnish proof that they are authorized to work in the country they are applying on a permanent basis without sponsorship.
EEO Statement
At Accuray, our commitment to patient-first outcomes drives an inclusive and collaborative work environment where the best ideas rise to the top — and everyone works to push them further. We value diversity in both the professional and personal backgrounds of our employees, as this variety adds rich energy to every team, every project and every work day. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity or national origin – including individuals with disabilities and veterans.
See All 25 Systems Engineer Jobs in Wisconsin
Find roles in Wisconsin that match your experience and apply in just a few clicks.
Find Systems Engineer JobsSystems Engineer Jobs by City in Wisconsin
Where Wisconsin roles are concentrated, by current openings.
Systems Engineer Job Market in Wisconsin
A snapshot from current Wisconsin openings, updated as new roles post.
Who's Hiring



Top Industries Hiring
- Manufacturing
- Consulting & Professional Services
What Wisconsin Employers Look For
The qualifications that appear most often in systems engineer jobs across Wisconsin.
- Bachelor's degree in systems engineering, electrical engineering, or a related technical discipline
- Experience with systems integration, requirements analysis, and verification and validation processes
- Proficiency with model-based systems engineering tools such as MATLAB, Simulink, or SysML
- Familiarity with industrial automation protocols including PLC programming and SCADA systems
- Ability to obtain or maintain a security clearance for defense and government contract roles
- Strong cross-functional collaboration skills working with hardware, software, and manufacturing teams
Systems Engineer Jobs in Wisconsin: Frequently Asked Questions
How do you become a systems engineer in Wisconsin?
Most Wisconsin employers require a bachelor's degree in systems engineering, electrical engineering, mechanical engineering, or computer science as the starting point. Wisconsin does not require a state-issued license specifically for systems engineers, though engineers whose work crosses into professional engineering sign-offs may pursue licensure through the Wisconsin Department of Safety and Professional Services. Certifications such as the INCOSE Certified Systems Engineering Professional credential are well recognized by Wisconsin defense and manufacturing employers and strengthen your candidacy considerably.
Which companies hire systems engineers in Wisconsin?
Wisconsin systems engineer roles are posted by Werfen, GE HealthCare, and Trane Technologies and others right now, based on current listings on Migrate Mate as of August 2026. Wisconsin's deep manufacturing and defense base means many of these openings are with industrial equipment makers, defense prime contractors, and automation technology companies concentrated in the Milwaukee metro and Fox Valley.
Which Wisconsin cities have the most systems engineer jobs?
Madison, Waukesha, and Neenah are the Wisconsin cities with the most systems engineer openings. Milwaukee leads because of its dense cluster of industrial automation and defense employers, while Madison's technology and government contractor presence drives consistent demand, and smaller Fox Valley cities reflect the strong manufacturing base anchored by large equipment and specialty vehicle manufacturers headquartered in that region.
Are there remote systems engineer jobs in Wisconsin?
Yes, but they're less common than in purely software-focused fields because systems engineering in Wisconsin frequently involves hands-on integration, lab work, and manufacturing floor collaboration. About 38% of systems engineer openings tied to Wisconsin are remote or hybrid as of August 2026, reflecting a market where flexibility exists but on-site presence remains the norm. Requirements definition, architecture, and documentation work are the functions most likely to be performed remotely.
How can I get hired as a systems engineer in Wisconsin with little or no experience?
The most realistic entry path is through a new-graduate associate engineer or systems engineer in training program at a large Wisconsin manufacturer or defense contractor. Companies like Oshkosh Corporation and Rockwell Automation run structured rotational or new-grad engineering programs that place candidates without industry experience into supervised systems roles. A degree in electrical, mechanical, or computer engineering is the minimum bar, and a capstone project or internship involving integration, controls, or embedded systems makes a portfolio tangible to hiring managers reviewing entry-level candidates.
Where can I find and apply to systems engineer jobs in Wisconsin?
You can find and apply to systems engineer jobs in Wisconsin on Migrate Mate, which lists current openings from employers hiring in the state right now. Search for roles that fit your specialization and experience level, then apply directly to the ones that match. No sign-up is required to view listings.
See All 25 Systems Engineer Jobs in Wisconsin
Find roles in Wisconsin that match your experience and apply in just a few clicks.
Find Systems Engineer Jobs